| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4920 |
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| Symbol | |
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| ID | 5872733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5487610 |
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| End bp | 5488485 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641550056 |
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| Product | ABC transporter related |
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| Protein accession | YP_001671140 |
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| Protein GI | 167035909 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000108293 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000000000110275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGACG ATATCATTCT CTCGGTCGAC AACCTGATGA TGCAGTTCGG TGGCATCAAG
GCGCTCAGCG ACGTCAGCCT CAAGGTCCGG CGCAATCAGA TCTTTGCCTT GATCGGCCCC
AACGGCGCCG GCAAGACCAC GGTATTCAAC TGCCTGACCG GCTTCTACAA GGCCAGTGGC
GGGCGTATCG AGCTGAACGT GCGCGGCAGT CACACCAACG TCATCCAGCT GCTTGGCGAA
CGCTTCCAGG CGGCCGATTT CGTGTCGCCT GCGCGCTTTG CCAACCGCAT GTACTACAAG
ATGTTCGGCG GCACCCACCT GGTCAACCGC GCGGGCCTGG CGCGCACCTT CCAGAACATT
CGCCTGTTCA AGGAAATGTC GGTGGTGGAG AACCTGCTGG TGGCCCAGCA CATGTGGGTC
AATCGCAACC TGCTGGCCGG GGTGCTCAAC ACCAAGGCCT ACCGCAAGGC CGAAAGCGAT
GCGTTGGACC ACGCGTTCTA CTGGCTTGAA GTGGTCGACC TGGTCGACTG CGCCAACCGC
CTGGCCGGCG AGTTGTCGTA CGGCCAGCAG CGGCGCCTGG AAATTGCCCG AGCCATGTGC
ACACGGCCGA AAATCATCTG CCTGGATGAA CCGGCGGCGG GCCTGAACCC CCAGGAAACC
GAAGCCCTCA GCCGCATGAT CCGCGTACTG CGTGACGAGC ACGACATCAC CGTGGTGCTG
ATCGAGCATG ACATGGGCAT GGTCATGAGC ATTTCCGACC ATATCGTGGT GCTGGACCAT
GGCAACGTGA TTGCCGAAGG CGCGCCGCAG GACATCCGCC ACAACCCGAC GGTGATCGCC
GCCTACCTGG GTGCAGACGA AGAGGAACTG GTATGA
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| Protein sequence | MSDDIILSVD NLMMQFGGIK ALSDVSLKVR RNQIFALIGP NGAGKTTVFN CLTGFYKASG
GRIELNVRGS HTNVIQLLGE RFQAADFVSP ARFANRMYYK MFGGTHLVNR AGLARTFQNI
RLFKEMSVVE NLLVAQHMWV NRNLLAGVLN TKAYRKAESD ALDHAFYWLE VVDLVDCANR
LAGELSYGQQ RRLEIARAMC TRPKIICLDE PAAGLNPQET EALSRMIRVL RDEHDITVVL
IEHDMGMVMS ISDHIVVLDH GNVIAEGAPQ DIRHNPTVIA AYLGADEEEL V
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