| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4899 |
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| Symbol | |
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| ID | 5872712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5467832 |
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| End bp | 5469319 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641550035 |
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| Product | urea ABC transporter, permease protein UrtB |
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| Protein accession | YP_001671119 |
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| Protein GI | 167035888 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0444635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGAC TCCTGCTCAC CCTGCTCCTG CTACTGCCGC TGGCAACCCA GGCCAGCGAG
GGCGAATTCC TCCTTACCGC CAAGCCCGCC GAGCAAGCCC GTCTGCTCGA AGGCTGGGCG
GCGCAACCCG ATGCCGCGCG CCTGCCACTG CTGAATGAAC TGCGCCAAGG CCGCATCGCC
GCCGATGACA CCCGCAAGTT ACGCCTGAAC AACCGCCTGC GCGGCCTGAT CGACAACGCC
CTGGCCAGCC ACCAGTTGCT CAGCGACAAC AGCGACACCC GCCTGGCCGC CGCCCAACAC
CTGCAAAAAA GCGCACAACC GGCGCAGATG GCCTTCCTCG ACCGGCGCTT CGCCGCCGAG
CCGGACGCCG CCGTCCACGC CGCCCTGGGC CTGGCCCTGG CCAACCTGCA ACTGGGCGCC
AGCGAACCCG CCGTTCGCCT GGCCGCCGTG CGCCTGCTGG GTGAAACCGG CGACCCGCTG
GCCCGCACCC GCCTCGAAGC GCTGCTGCAA CCGGATGCGG AAGCCGATGC CGGCGTACGC
ACCGCCGCCG AAACCAGCCT GGCCCAGGTC AAGCGCAAGC TGCTGGTCGG CGAACTGCTC
GGCCAGGCGT TCAGTGGCCT TTCGCTGGGT TCGATCCTGC TGCTGGCGGC GCTCGGCCTG
GCGATCACCT TTGGCCTGCT CGGGGTGATC AACATGGCCC ACGGCGAGAT GCTGATGCTC
GGCGCGTACA GCACCTACAT GGTCCAGGTG CTGCTGCAGC GCTACGCCCC AGGCGCCATT
GAGTTCTACC CGCTGATCGC CCTGCCGGTG GCCTTCGCGG TCAGTGCCGG TGTGGGCATG
GCGCTGGAGC GCACGGTCAT CCGCCACCTG TACGGCCGCC CACTGGAAAC CCTGCTGGCT
ACCTGGGGCA TCAGCCTGAT CCTGATCCAG GCCATTCGCC TGCTGTTCGG CGCGCAGAAC
GTCGAGGTGA GCAACCCGGC CTGGCTGTCC GGCGGTATCC AACTGCTGCC CAACCTGGTG
CTGCCGTACA ACCGCCTGGT GATCATCGGT TTCGCCCTGG CCGTGGTCCT GCTCACCTGG
CTGCTGCTCA ACCGCACGCG GCTGGGCCTG AACGTGCGCG CAGTCACCCA GAACCGCAAC
ATGGCGGCTT GCTGCGGGGT GTCCACCGGG CGCGTCGACA TGCTCGCCTT TGGCCTGGGT
TCTGGCATCG CCGGGCTCGG CGGCGTAGCC CTGAGCCAGG TCGGCAACGT CGGCCCCGAT
CTGGGCCAAA GCTACATCAT CGACTCGTTC CTGGTGGTGG TGCTGGGTGG CGTAGGGCAA
CTGGCCGGCA GCCTGTGGGC CGCCTTCGGC CTTGGCATCG CCAACAAGCT GCTGGAGCCG
CAGATCGGTG CCGTGCTCGG CAAGATCCTC ATCCTTGCGT TGATCATTCT GTTCATCCAG
AAGCGTCCGC AAGGCCTGTT CGCCCTCAAG GGACGGGTAA TCGACTGA
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| Protein sequence | MLRLLLTLLL LLPLATQASE GEFLLTAKPA EQARLLEGWA AQPDAARLPL LNELRQGRIA
ADDTRKLRLN NRLRGLIDNA LASHQLLSDN SDTRLAAAQH LQKSAQPAQM AFLDRRFAAE
PDAAVHAALG LALANLQLGA SEPAVRLAAV RLLGETGDPL ARTRLEALLQ PDAEADAGVR
TAAETSLAQV KRKLLVGELL GQAFSGLSLG SILLLAALGL AITFGLLGVI NMAHGEMLML
GAYSTYMVQV LLQRYAPGAI EFYPLIALPV AFAVSAGVGM ALERTVIRHL YGRPLETLLA
TWGISLILIQ AIRLLFGAQN VEVSNPAWLS GGIQLLPNLV LPYNRLVIIG FALAVVLLTW
LLLNRTRLGL NVRAVTQNRN MAACCGVSTG RVDMLAFGLG SGIAGLGGVA LSQVGNVGPD
LGQSYIIDSF LVVVLGGVGQ LAGSLWAAFG LGIANKLLEP QIGAVLGKIL ILALIILFIQ
KRPQGLFALK GRVID
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