| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4898 |
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| Symbol | |
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| ID | 5872711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5466447 |
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| End bp | 5467712 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641550034 |
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| Product | urea ABC transporter, urea binding protein |
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| Protein accession | YP_001671118 |
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| Protein GI | 167035887 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0308389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTC GCAGTCTGAT CAAGGCTTTT ACCCTCAGCG CATCGATTGC GGCGATGGGC
CTGAGCTGGA GCATCCAGGC CGCCGAGACC ATCAAGGTCG GCATCCTGCA TTCGCTTTCC
GGGACCATGG CCATTTCCGA GACCTCGCTC AAGGACATGG CGCTGATGAC CATCGACGAA
ATCAACGCCA AGGGCGGTGT GAACGGCAAG ATGCTCGAGC CGGTAGTGGT CGACCCAGCC
TCCAACTGGC CGCTGTTCGC TGAAAAGAGC CGTCAGTTGC TGACCCAGGA CAAGGTCGCC
GTGGTGTTCG GCTGCTGGAC CTCGGTGTCG CGCAAGTCAG TGCTGCCGGT GTTCGAAGAG
CTCAACGGCC TGCTGTTCTA TCCGGTGCAG TACGAAGGTG AAGAGATGTC GCCGAACGTG
TTCTACACCG GCGCCGCGCC CAACCAGCAG GCGATTCCGG CCGTGGAATA TTTGATGAGC
GAGGACGGCG GTAGCGCCAA ACGCTTCTTC CTGCTGGGCA CCGACTACGT CTACCCGCGC
ACCACCAACA AGATTCTGCG CGCCTTCCTG CATAGCAAGG GTGTGGCCGA CAAGGATATC
GAAGAGGTGT ACACGCCGTT CGGCCACGCC GATTACCAGA CCATCGTCGC CAACATCAAG
AAGTTCTCCG CCGGTGGCAA GACGGCGGTC ATTTCCACGG TCAACGGCGA CTCCAACGTG
CCGTTCTACA AGGAGCTGGC CAACCAGGGC CTGAAGGCTA CCGACGTGCC AGTGGTAGCC
TTCTCGGTGG GCGAAGAGGA GCTGCGCGGC ATCGACACCA AGCCACTGGT GGGCCACCTG
GCGGCGTGGA ACTACTTCGA ATCGGTGGAT AACCCGGTGA ACCAGAAGTT CGTCGCCGAC
TGGAAGGCCT ATGCCAAAGC CAAGGGCCTG CCGGGTGCCG ACAAGGCCGT AACCAACGAC
CCGATGGAAG CCACCTATGT GGGCATCCAC ATGTGGGCGC AAGCAGTGGA AAAAGCCAAG
TCCACCGACG TCGACAAGGT GCGTGAGGCG CTGGCCGGGC AGAGCTTCAA GGCGCCCTCG
GGCTTCACCC TGACCATGGA CAAGACCAAC CACCACCTGC ACAAGCCGGT GATGATCGGC
GAGATCCAGG ATGACGGGCA GTTCAGCGTG GTGTGGGAAA CCGAGCAGCC GCTGCGGGCG
CAGCCATGGA GCCCGTTCAT CCCGGGCAAC GACAAGCGCC CGGACTATGC AGTGAAAGGT
AACTGA
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| Protein sequence | MKRRSLIKAF TLSASIAAMG LSWSIQAAET IKVGILHSLS GTMAISETSL KDMALMTIDE
INAKGGVNGK MLEPVVVDPA SNWPLFAEKS RQLLTQDKVA VVFGCWTSVS RKSVLPVFEE
LNGLLFYPVQ YEGEEMSPNV FYTGAAPNQQ AIPAVEYLMS EDGGSAKRFF LLGTDYVYPR
TTNKILRAFL HSKGVADKDI EEVYTPFGHA DYQTIVANIK KFSAGGKTAV ISTVNGDSNV
PFYKELANQG LKATDVPVVA FSVGEEELRG IDTKPLVGHL AAWNYFESVD NPVNQKFVAD
WKAYAKAKGL PGADKAVTND PMEATYVGIH MWAQAVEKAK STDVDKVREA LAGQSFKAPS
GFTLTMDKTN HHLHKPVMIG EIQDDGQFSV VWETEQPLRA QPWSPFIPGN DKRPDYAVKG
N
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