Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4890 |
Symbol | |
ID | 5872703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5457000 |
End bp | 5457854 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550026 |
Product | band 7 protein |
Protein accession | YP_001671110 |
Protein GI | 167035879 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.152851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCC TCATCGTCGT CGGCGCCATC GCCCTGTTCG TCCTGATCAC CGTGTTCAAA GGGGTGCGCA TCGTGCCCCA AGGCGAGGAA TGGATCGTCG AGCGCCTGGG CCGCTATCAC AGCACGCTCA AACCGGGCCT GAACATTCTC ATCCCGTACA TGGACGTGGT CGCCTACCGC CTGCCGACCA AGGACATCAT CCTCGATGTG CAACAGCAGG AAATCATCAC CAGGGACAAC GCCGTAATCG TCGCCAACGC CCTGTGCTTC GCCAAGGTGG TCGACCCGCA GAAAGCCTCG TATGGCGTGC AGAATTTCTC GTTCGCCGTC ACCAGCCTGA CGATGACCTC GCTGCGCGCC ATCGTCGGCG CCATGGACCT GGACGAAGCG TTGTCCAGCC GCGAGCAGAT CAAGGCCCGC CTGCGCGAGG CAATGTCCGA GCAGACCGAA GACTGGGGCG TTACCGTGCG TTCGGTGGAA ATCCAGGACA TCAAGCCTTC GGAAAACATG CAACTGGCCA TGGAACGCCA GGCCGCCGCC GAGCGTGAGC GCAAGGCCGA TGTAACCCGC GCCGAAGGTG CCAAGCAGGC AGCGATCCTT GAAGCCGAAG CACGCCTGCA GGCAGCCAGG CTGGATGCAG AGGCGCAGAT CAGCCTGGCC GAGGCCTCGG CGCGGGCGAT TTCGCTGGTC AAGGAAGCGG TGGGCAACGA GACCGTGCCG GCCATGTACC TGCTGGGCGA GCGCTATATC GGGGCCATGG AGAACCTGGC GGGCAGCAAC AATGCCAAGG TGGTGGTGTT GCCGGCGGAC CTGCAAGAGA CCGTGCGCGG GTTGATGGGC CGTAACAAGG CTTGA
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Protein sequence | MTSLIVVGAI ALFVLITVFK GVRIVPQGEE WIVERLGRYH STLKPGLNIL IPYMDVVAYR LPTKDIILDV QQQEIITRDN AVIVANALCF AKVVDPQKAS YGVQNFSFAV TSLTMTSLRA IVGAMDLDEA LSSREQIKAR LREAMSEQTE DWGVTVRSVE IQDIKPSENM QLAMERQAAA ERERKADVTR AEGAKQAAIL EAEARLQAAR LDAEAQISLA EASARAISLV KEAVGNETVP AMYLLGERYI GAMENLAGSN NAKVVVLPAD LQETVRGLMG RNKA
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