Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4860 |
Symbol | |
ID | 5872673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5426602 |
End bp | 5428491 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549996 |
Product | penicillin-binding protein 2 |
Protein accession | YP_001671080 |
Protein GI | 167035849 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.493297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGC CGATCCGTCT CAAGGACCAC GAGAAAGACG CCCGCCTGGT GCGCAACCGC GTCGTGGTCG GCGCGGTGGC GATCATGCTG CTTATTTGCG TGCTGATTGC GCGGCTGTAC TACCTGCAGA TCATCCAGTA CGACTACCAC TCCACGCTGT CGGAAAACAA TCGGGTGCAC GTGCAGCCGA TCCCGCCGAC CCGCGGGCTG ATCTTCGACC GCAATGGGGT GATCGTCGCC GATAACCGGC CCAGCTTCAG CCTGTCGATG ACCCGCGAAC GCGCGGGTAA CTGGCAGGAA GTGCTGGATA CCATCGTTGA AGTGCTGGAG CTGACCGACG ACGACCGCGC CCTGTTCGAG AAGCGCATGC GCCAGGGCCG CCGGCCGTTC GAGCCGGTGC CGATTCTGTT CGAGCTCAAC GAAGAGCAGA TCGCCCGGGT GGCGGTAAAC CAGTTCCGCC TGCCGGGCGT GGAAGTGGTG GCCCAGTTGG TGCGGCATTA CCCGCAGGGC GCGCATTTCG CCCATTCGGT GGGGTATGTA GGGCGGATTA ACGAGAAAGA GCTGAAAACG CTCGACCCGG TGAACTACAG CGGCACCCAC CATATCGGCA AGACGGGCAT CGAGCGTTTC TACGAAGATG CCCTGCACGG CCAGGTGGGT TACGAGGAAG TCGAGACCAA CGCCCGTGGC CGTGTGCTGC GGGTGCTCAA GCGTACCGAC CCTAAACCGG GCAAGGACAT TGTGCTGAGC CTGGACATCA AGCTGCAGGA GGCTGCCGAG GCTGCCCTGG GTGGCCGACG CGGCGCGGTG GTGGCGCTCG ACCCTCGGAC CGGCGAGGTG CTGGCGATGG TCAGCCAGCC AAGCTTCGAC CCCAACCTGT TCGTTACCGG CATCAGCTTC AAGGCCTATG CCGAACTGCG CGACTCGATA GACCGGCCGC TGTTCAACCG CGTGCTGCGC GGCCTGTACC CACCGGGTTC GACCATCAAG CCGGCGGTGG CCATTGCTGG CCTGGACAGT GGTGTGGTCA ATGCGGGCAG CCGGGTGTTC GACCCGGGCT ACTACCAGTT GCCCAACTAC GATCACAAAT ACCGTAACTG GAACCGTTCC GGTGATGGCT GGGTCGACCT GGACACCGCC ATCATGCGGT CCAACGACAC CTACTTCTAC GACCTTGCGC ACAAGATGGG CATCGATCGG CTGTCCAGCT ACATGAACAA GTTCGGCATC GGCCAGCGGG TTTCCCTCGA CATGTTCGAG GAGTCCGCCG GGTTGATGCC TTCGCGCGAA TGGAAGCGTG CTACCCGTCG CCAGGCCTGG TTCCCCGGCG AAACCCTGAT TCTCGGCATC GGCCAGGGCT ACATGCAGGC CACGCCGCTG CAACTGGCCC AGGCCACTGC ATTGATCGCC AACAAAGGCG TGTGGAACCG CCCGCACCTG GCCAAGACCA TCGAAGGCCA GGCACCGGTG GACGACAACC CGATGGAAGA CATCGTGCTG CGTGACAAGT CCGACTGGGC CAAGGTCACC CATGGCATGG AGCAGGTGAT GCACAACGCC CGTGGTACCG CGCGCAAGGC CGCCGCCGGT GCTCAGTACC GCATTGCCGG CAAGAGCGGT ACCGCCCAGG TGGTGGCGAT CAAGCAGGGC GAAAAGTACG ACCGCAACAA GCTCCAGGAG CGCCACCGCG ACCACGCGCT GTTCGTCGCC TTTGCCCCGG CCGAGGCCCC GAAAATCGTG GTGTCGGTAA TGGTCGAGAA CGGTGAGTCC GGCTCTGGCG TCGCCGCGCC GGTGGTACGC CAGATCATGG ACGCCTGGCT GCTCGATGAA AATGGCCGGC TCAAGCCCGA GTTCGCGCCT GCCACCGTTA CCCAGGAATC GCCTCTGTGA
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Protein sequence | MSQPIRLKDH EKDARLVRNR VVVGAVAIML LICVLIARLY YLQIIQYDYH STLSENNRVH VQPIPPTRGL IFDRNGVIVA DNRPSFSLSM TRERAGNWQE VLDTIVEVLE LTDDDRALFE KRMRQGRRPF EPVPILFELN EEQIARVAVN QFRLPGVEVV AQLVRHYPQG AHFAHSVGYV GRINEKELKT LDPVNYSGTH HIGKTGIERF YEDALHGQVG YEEVETNARG RVLRVLKRTD PKPGKDIVLS LDIKLQEAAE AALGGRRGAV VALDPRTGEV LAMVSQPSFD PNLFVTGISF KAYAELRDSI DRPLFNRVLR GLYPPGSTIK PAVAIAGLDS GVVNAGSRVF DPGYYQLPNY DHKYRNWNRS GDGWVDLDTA IMRSNDTYFY DLAHKMGIDR LSSYMNKFGI GQRVSLDMFE ESAGLMPSRE WKRATRRQAW FPGETLILGI GQGYMQATPL QLAQATALIA NKGVWNRPHL AKTIEGQAPV DDNPMEDIVL RDKSDWAKVT HGMEQVMHNA RGTARKAAAG AQYRIAGKSG TAQVVAIKQG EKYDRNKLQE RHRDHALFVA FAPAEAPKIV VSVMVENGES GSGVAAPVVR QIMDAWLLDE NGRLKPEFAP ATVTQESPL
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