Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4857 |
Symbol | |
ID | 5872670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5423431 |
End bp | 5424432 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549993 |
Product | rare lipoprotein A |
Protein accession | YP_001671077 |
Protein GI | 167035846 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.292191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCAA TCATCTCTGG CAACGCTTTC AAGCTGTTCA CCTGCCTCGC CGTCGGCGTG GCGCTGGCCA GTTGCTCTTC CAGCCGTCCG ACCCAGCAAA GCAGTGGCAA TGTCGTGCGC AGCCAGCCGG GCCTGGACAT CAACCGGGCG CACAAGGACG GCGCACCGTG GTGGGACGTG GATGTGAACA AGATCCCCGA TGCCACGCCG ACCGTGCATA CCGGCAACTA CAAGGCCAAC CCGTACACGG TGCTGGGCAA GACGTACTAC CCGATGCAGG ACTCGCGCAA CTACCGCGCC GAGGGCACGG CGTCGTGGTA TGGCACCAAG TTCCACGGGC AAAACACCGC TAACGGCGAG CTGTACGACC TGTATGGCAT GAGCGCGGCG CACAAGACCC TGCCGCTGCC GGCCTATGTG CGGGTGACCA ACCTGGCCAA CGGCCGTAGC GTGATCCTGC GGGTGAACGA CCGTGGCCCG TTCTATTCCG ACCGCATCAT CGACCTGTCC TATGCCGCGG CGAAAAAGCT CGGCTATGCG GAGATCGGCA CCGCGCACGT GCGCGTCGAG GGTATCGACC CGCAGCAGTG GTGGGCCCAG CGTGGCCAGA CGCCGCCGAT GGTGCTGAAA GAGCCACAAG TGGCGCAGAC CCAAGCGATC CCGGCCAGCA CCGGGCGCGT CGAGCAATGG ACCCCGCCGC CACAGCAGCA TGCGGCGCCG GTGGTGCCGG TTCAGGTAGG TGGCAACAAT GTACCCGGCG GCAACGGCGG CAGCTTCCTG CAGGTAGGCG CTTTCGCCAA CCCGGACGCT GCCGAGTTGC TGCGCTCCAA GCTCAGCACC ATGGTCAGCG CGCCGGTGTT CATCAGCTCG ATCGTGCGAA ACCAGCAGAC CCTGCACCGC GTGCGCCTGG GGCCGATTGG CAGCCAAGGT GAGATCCAGC AAGCACAAGA CAGCATCCGC CTGGCGAACT TGGGGCAGGC CAAGCTGGTC ACAGCTGACT GA
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Protein sequence | MRAIISGNAF KLFTCLAVGV ALASCSSSRP TQQSSGNVVR SQPGLDINRA HKDGAPWWDV DVNKIPDATP TVHTGNYKAN PYTVLGKTYY PMQDSRNYRA EGTASWYGTK FHGQNTANGE LYDLYGMSAA HKTLPLPAYV RVTNLANGRS VILRVNDRGP FYSDRIIDLS YAAAKKLGYA EIGTAHVRVE GIDPQQWWAQ RGQTPPMVLK EPQVAQTQAI PASTGRVEQW TPPPQQHAAP VVPVQVGGNN VPGGNGGSFL QVGAFANPDA AELLRSKLST MVSAPVFISS IVRNQQTLHR VRLGPIGSQG EIQQAQDSIR LANLGQAKLV TAD
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