| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4844 |
|---|
| Symbol | lnt |
|---|
| ID | 5872657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 5409834 |
|---|
| End bp | 5411351 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641549980 |
|---|
| Product | apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_001671064 |
|---|
| Protein GI | 167035833 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.552658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTGGA TCACCCGCCC CGGCTGGCCC GGTAACCTGC TGGCCCTGGC GGCCGGTGCT
TCCACCCTAC TGGCCTTGGC GCCGTTCGAC ATCTGGCCGC TGGCCGTGCT GTCCATCGCC
ATGCTCTACC TCGGCTTGCG CGAGCTCAGC CCGCGCCAGG CCATGTGGCG TGGCTGGTGG
TTCGGTTTTG GCCTGTATGG CGCTGGCACC TGGTGGATCT ACGTCAGCAT GAACACCTAT
GGCGGCGCCT CGCCGCTGTT GGCCATTCTG CTGCTGTTGG CGTTTTTCGC CGCCCTGGCG
TGGTTCTTTG CCCTGCCCAC CTGGTTATGG GCGCGCTGGC TACGGCGCAA CGAAGCGCCA
CTGGCCGACG CCCTGTGCTT CGCCGCCCTG TGGCTGCTGC AAGAGGCCTT CCGCGGCTGG
TTCCTGACCG GCTTCCCTTG GCTCTACGCC GGCTACAGCC AGCTGGACGG CCCACTGGCC
GGCCTGGCAC CGCTGGGCGG CGTGTGGCTC ATATCCTTCA CCCTGGCCCT CACCGCTGCC
CTGCTGTGCA ACCTGCACCG CCTGCGCGCC CGTCCCTCGT TCCTGGCGGT GGCCACTGTA
CTGCTACTGG CCCCTTGGGT GCTGGGCCTG GCGCTCAAGG GCCATGCCTG GACCAAGCCG
GCTGGCGACC CGCTGAAAGT GGCGGCAATC CAGGGCAACG TGGAGCAGGA CCTGAAATGG
GACCCGGCAC ACATCGACGC GCAACTGGCG CTGTACCGCG ACCTGAGCTT CAGTTCCAAG
CCGGTGGACC TGCTTGTCTG GCCGGAAACT GCGGTGCCGG TACTCAAGGA CCAGGCGCAA
GGCTACATCG ACGTAATGGG CCGCTTCGCC GCCGAGCGGC ATTCGGCGCT GATCACCGGC
GTACCAGTGC GTGAAGAAGT GCACCACCAG CGCCGCTACT ACAACGGCAT CACTGCCACT
GGCGAAGGTG ACGGCACCTA CCTCAAGCAA AAGCTGGTGC CGTTTGGCGA ATATGTACCG
CTGCAAGACC TGCTGCGTGG CGCCATCGAG TTCTTCAACC TGCCCATGTC GGACTTTGCC
CGCGGGCCGG AGGACCAGCC GCTGCTGCAG GCCAAGGGTT ACCAGATTGC GCCGTACATC
TGTTACGAGG TGGTCTACCC CGAGTTCGCC GCCGGCCTGG CCGCGCGCAG CGACCTGCTG
CTGACCATCA GCAACGACAC CTGGTTCGGT AAATCGATCG GCCCCTTGCA GCACCTGCAA
ATGGCACAAA TGCGTGCGCT GGAAGCCGGC CGCTGGATGA TCCGCGCCAC CAACAACGGC
GTGACTGCGC TGATCGACCC ATTTGGCCGC ATTACCACGC AGATTCCGCA GTTCCAGCAA
GCCGTGCTGT ATGGCGAAGT GGTGCCGATG CAGCAACTGA CGCCTTACCT GCAATGGCGT
TCGTGGCCGC TGGCGATTGT CTGTGCGCTG CTGCTGGGTT GGGCGTTGCT GGCAGGCCGC
ATAGCCAAGA CTGTTTAA
|
|---|
| Protein sequence | MRWITRPGWP GNLLALAAGA STLLALAPFD IWPLAVLSIA MLYLGLRELS PRQAMWRGWW
FGFGLYGAGT WWIYVSMNTY GGASPLLAIL LLLAFFAALA WFFALPTWLW ARWLRRNEAP
LADALCFAAL WLLQEAFRGW FLTGFPWLYA GYSQLDGPLA GLAPLGGVWL ISFTLALTAA
LLCNLHRLRA RPSFLAVATV LLLAPWVLGL ALKGHAWTKP AGDPLKVAAI QGNVEQDLKW
DPAHIDAQLA LYRDLSFSSK PVDLLVWPET AVPVLKDQAQ GYIDVMGRFA AERHSALITG
VPVREEVHHQ RRYYNGITAT GEGDGTYLKQ KLVPFGEYVP LQDLLRGAIE FFNLPMSDFA
RGPEDQPLLQ AKGYQIAPYI CYEVVYPEFA AGLAARSDLL LTISNDTWFG KSIGPLQHLQ
MAQMRALEAG RWMIRATNNG VTALIDPFGR ITTQIPQFQQ AVLYGEVVPM QQLTPYLQWR
SWPLAIVCAL LLGWALLAGR IAKTV
|
|---|
| |