Gene PputGB1_4818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4818 
Symbol 
ID5872632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5386518 
End bp5386886 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content57% 
IMG OID641549956 
ProductISPs1, transposase OrfA 
Protein accessionYP_001671040 
Protein GI167035809 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.886393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGGC GTTACGAACT TTCTGATGCG TCATGGGAGC TGATCAAGGA TTTGGTTTCT 
CCAGAACAGA AAATGGGCCG TCCTCGCAAC GATGATCGTC AGGTTCTCCA CGGAATTCTG
TGGATCCTGT GCTCGGGCGC TCCCTGGCGC GACCTGCCTG AACGCTTTGG GCCTTGGTCA
ACGGTGTATC AGCGTTTTCG TGACTGGCGC GACGACGGCA CATTCGAGCG AGTACTGGAG
CGTCTGCATA TTCGGCTGAA CCGGGAAGGA CTGATCGACT TGGACACCTG GATGATCGAC
TCCACCGCAG TACGAGCAAC CCGAGCCTCT TCAGGCGCCG GGGAAAAGGG GGGCCTGAAG
AACCGTTAG
 
Protein sequence
MARRYELSDA SWELIKDLVS PEQKMGRPRN DDRQVLHGIL WILCSGAPWR DLPERFGPWS 
TVYQRFRDWR DDGTFERVLE RLHIRLNREG LIDLDTWMID STAVRATRAS SGAGEKGGLK
NR