| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4779 |
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| Symbol | |
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| ID | 5872593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5345339 |
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| End bp | 5346670 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549917 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001671001 |
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| Protein GI | 167035770 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00319736 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCG CCAAACTCGG CCTGATCGAA CCGCTGCTGC GTACCCTGCA GCAGCTGGAC
TACACCACCC CGACCCCGGT GCAGGCCAAG GCCATCCCCG CCGTGCTGGC CGGCCGCGAC
CTGATGGCCG CAGCCCAGAC CGGTACCGGC AAGACCGCAG GCTTTGCCTT GCCCGTGCTG
CAGCGCCTGG CGCTGGAAGG CGAAAAGGTG GCCAGCAACT CCATCCGTGC GCTGGTGCTG
GTACCTACCC GCGAACTGGC CGAGCAGGTG CACAACAACG TGCGCGAATA CGCCGAGAAC
CTGCCGCTGA GCACCTACGC GGTGTATGGC GGCGTCAGCA TCAACCCGCA GATGATGCGC
CTGCGCCGTG GTGTCGACCT GCTGGTGGCC ACCCCGGGTC GTTTGCTCGA CCTGTTCCGG
CAGAACGCGG TGAAGTTCAA CCAGGTGCAG ACCCTGGTAC TGGACGAAGC CGACCGCATG
CTCGACCTGG GCTTTGCCGA GGAGCTGCAA TCGGTTTACG CGGCGCTGCC CCGCAAGCGC
CAGACGCTGC TGTTCTCCGC CACCTTCTCC GATCAGATTC GCGTGCTGGC GGGGTTGGCC
TTGAATGACC CGCTCAGTAT CGAAGTGAGC CCGCGCAACG CCACCGCGAC CAGCGTCAAG
CAGTGGCTGG TGCCTGTGGA TAAAAAGCGC AAGGAAGACC TGTTCTGCCA CCTGCTGCGC
AAGCAGCGCT GGACCCAGGT GCTGGTGTTC GCCAAGACCC GTAACGGTGT CGACCAACTG
GTGCAGCGTT TGCTGGCCGA AGGTGTGAAC GCCGACGGCA TTCATGGGGA CCGCCCGCAG
GCTACCCGTC AGCGCGCGCT GGACAGCTTC AAGGCCCGCG AAGTGCAGGT GCTGGTGGCC
ACCGATGTGG CAGCCCGTGG CCTGGACATC GATGATTTGC CGCTGGTGGT CAACCTTGAC
CTGCCGATCG TTGCCGAGGA CTACGTGCAC CGCATCGGCC GTACCGGGCG GGCGGGCAAC
AAGGGCGAGG CGATTTCGCT GGTGTGCGCG GATGAAGTGC AACTGCTGGC GGCTATCGAA
GTGCTGACCC GGCAGACCCT GCCGCGTCAT GAAGAGCCTG ATTTTATCCC TGATCACCGG
GTGCCGCTGA CCGATGCCAG TGGCCAGGTG ATCAAGAAAC CGAAGAAGCC CAAGAAGCCG
AAAGAAAACA GCGCCAAGCG CGGGCTGGGC CGTTGGATGG ACAGTTCTGA GGCGGGTAAT
TCCGAGCCGG CAGTCAAGGC GGTGCGCAAG GTGCCGAGTT TCAATGGTGG GCCGCGCAAG
CGTAAGCCCT GA
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| Protein sequence | MNFAKLGLIE PLLRTLQQLD YTTPTPVQAK AIPAVLAGRD LMAAAQTGTG KTAGFALPVL
QRLALEGEKV ASNSIRALVL VPTRELAEQV HNNVREYAEN LPLSTYAVYG GVSINPQMMR
LRRGVDLLVA TPGRLLDLFR QNAVKFNQVQ TLVLDEADRM LDLGFAEELQ SVYAALPRKR
QTLLFSATFS DQIRVLAGLA LNDPLSIEVS PRNATATSVK QWLVPVDKKR KEDLFCHLLR
KQRWTQVLVF AKTRNGVDQL VQRLLAEGVN ADGIHGDRPQ ATRQRALDSF KAREVQVLVA
TDVAARGLDI DDLPLVVNLD LPIVAEDYVH RIGRTGRAGN KGEAISLVCA DEVQLLAAIE
VLTRQTLPRH EEPDFIPDHR VPLTDASGQV IKKPKKPKKP KENSAKRGLG RWMDSSEAGN
SEPAVKAVRK VPSFNGGPRK RKP
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