Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4774 |
Symbol | |
ID | 5872588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5340435 |
End bp | 5341304 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549912 |
Product | acyl-CoA thioesterase II |
Protein accession | YP_001670996 |
Protein GI | 167035765 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0463605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCATG TGTTGGACGA CCTGGTCGAC CTGTTGAGCC TCGAAGCCAT CGAGGAGAAC CTGTTCCGTG GCCGCAGCCA GGACCTGGGC TTCCGCCAGC TTTACGGTGG GCAAGTGCTG GGGCAGTCGT TGTCGGCAGC CAGCCAGACG GTCGAGGACG CGCGCCATGT GCATTCGTTG CACGGCTACT TCCTGCGCCC GGGCGATGCC AGCCTGCCGG TGGTGTACTC GGTGGACCGC GTGCGCGATG GCGGCAGTTT CAGCACCCGG CGGGTGACGG CGATCCAGAA AGGCCAGACC ATCTTCACCT GCAGCGCATC GTTCCAGTAC GACGAGGAAG GGTTCGAGCA CCAGGCGCAG ATGCCAGAGG TGGTCGGCCC GGAAAACCTG CCGACCGAAG TCGAACTGGC CCGCGCCATG GCCGACCAGT TGCCCGAGCG CATTCGCGAC AAAGTGCTGT GCGCCAAGCC GATCGAGATC CGCCCGGTCA CCGAGCGTGA CCCGTTCAAC CCCAAGCCCG GCGACCCGGT GAAGTACGCC TGGTTCCGCG CCGACGGCAA CCTGCCTGAC GTACCCGCCC TGCACAAGTA CCTGCTGGCC TACGCCTCGG ACTTCGGCCT GCTGACCACT GCGCTGCTGC CCCATGGCAA GTCGGTGTGG CAGCGCGACA TGCAGATCGC CAGCCTCGAC CATTCGTTGT GGTTCCATGG CAACCTGCGC GCTGACGAAT GGCTGCTGTA CGCAACCGAT AGCCCCTGGG CCGGTAATTC CCGTGGTTTC TGCCGCGGCA GCATCTTCAA CCAGGCCGGG CAACTGGTGG CATCGTCCAG CCAGGAAGGC CTGATTCGTC ATCGCAAGGA TTGGGCATGA
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Protein sequence | MSHVLDDLVD LLSLEAIEEN LFRGRSQDLG FRQLYGGQVL GQSLSAASQT VEDARHVHSL HGYFLRPGDA SLPVVYSVDR VRDGGSFSTR RVTAIQKGQT IFTCSASFQY DEEGFEHQAQ MPEVVGPENL PTEVELARAM ADQLPERIRD KVLCAKPIEI RPVTERDPFN PKPGDPVKYA WFRADGNLPD VPALHKYLLA YASDFGLLTT ALLPHGKSVW QRDMQIASLD HSLWFHGNLR ADEWLLYATD SPWAGNSRGF CRGSIFNQAG QLVASSSQEG LIRHRKDWA
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