| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4765 |
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| Symbol | |
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| ID | 5872579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5330038 |
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| End bp | 5331429 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549903 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001670987 |
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| Protein GI | 167035756 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG TGGGATCTGA TGGCAACCTT GCACAAGGTT TCAAGCCACG TCATGTAACG
ATGCTGTCCA TCGCCGGCAT CATCGGCGCC GGACTTTTCG TAGGCTCCGG CCATGCCATC
GCGGCAGCCG GGCCAGCAAC CATAATTTCC TATTTCGTGG CCGGGACCCT GGTGGTACTG
GTCATGCGCA TGCTCGGCGA AATGGCCGTG GCACACCCTG ACACCGGATC GTTTTCCACC
TATGCCGACC AGGCCATTGG CCGCTGGGCC GGGTACACCA TCGGCTGGTT GTACTGGTGG
TTCTGGGTGC TGGTCATCCC TATCGAAGCG CTGGCCGCCG GGCATGTGCT GAACGCCTGG
TTCCCGCAGG TGGACAGCTG GATCTTCGCC TTGGCTTCGG TGCTGTTGCT GGCCGGTACC
AACCTGTTCA GTGTGGCCAA GTACGGCGAG TTCGAGTTCT GGTTCGCCAT CCTCAAGGTC
ACCGCCATTC TGGGTTTCAT CGGCCTGGGT TTCGCCGCGC TGATGGGTTG GCTGCCCAAC
CGTGAGGTCA GCGGGCTGAG CGGGTTGATG GCCGAGTACG GCGGCTTTGC GCCGAAGGGC
TGGTCGGCCG TGGTCGGTGC GTTCATTACC GTGATGTTCA GCTTCATCGG CACCGAGGCG
GTGACCATCG CGGCCTCCGA GTCCAGCGAC CCATCGCGCA ACATCGCCAA GGCCACCCGC
TCGGTGATCT GGCGTATCAG CACCTTCTAC ATCCTGTCGA TCTTCGTGAT CATCTCGGTG
GTGCCGTGGA ACGACCCGCA GCTGGCGGTG GTGGGTTCGT ACCAGCGTGC GCTGGAAATC
ATGAACATCC CCAACGCGGC GTTCATGGTC GACCTGGTGG TGCTGGTGGC CGTGACCAGT
TGCATGAACT CGTCGATCTA CATCGCTTCG CGGATGATGT ACTCGCTGGC CAAGCGCGGT
GACGCCCCGG CCTTCCTCAA CAAGACCTCC AAGGTCGGTG TACCGCGTGC CGCGGTGTTC
GGCAGCACGC TGATCGGTGC GGCCATCGCT GTGCTCAACT ACTTCGCGCC GAAGGGTGTG
TTCGAGTTCC TGCTGGCAAG CTCCGGCGCC ATTGCCTTGC TGGTGTACAT GGTCATCGCC
ATCTCGCAGC TGCGCATGCG CCGCCGCCTG GAGCGGGAAA ACACCGAGCT GAAGTTCCGC
ATGTGGCTGT TCCCGTACCT GACCTGGGCG GTGATCATCT TCATTGCCGG GGCGCTGGCG
GTGATGATGT ACACGCCTGA GCACCGGGCG GAAGTGAGTT CCACGTTGGG CCTGGCGATC
GTGATTTCCT TCCTGGGGAT CGTGACCTCG CGGGGCCATG CGCAACCGGT GGGGGCGCGG
TCGATGGGGT GA
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| Protein sequence | MNTVGSDGNL AQGFKPRHVT MLSIAGIIGA GLFVGSGHAI AAAGPATIIS YFVAGTLVVL
VMRMLGEMAV AHPDTGSFST YADQAIGRWA GYTIGWLYWW FWVLVIPIEA LAAGHVLNAW
FPQVDSWIFA LASVLLLAGT NLFSVAKYGE FEFWFAILKV TAILGFIGLG FAALMGWLPN
REVSGLSGLM AEYGGFAPKG WSAVVGAFIT VMFSFIGTEA VTIAASESSD PSRNIAKATR
SVIWRISTFY ILSIFVIISV VPWNDPQLAV VGSYQRALEI MNIPNAAFMV DLVVLVAVTS
CMNSSIYIAS RMMYSLAKRG DAPAFLNKTS KVGVPRAAVF GSTLIGAAIA VLNYFAPKGV
FEFLLASSGA IALLVYMVIA ISQLRMRRRL ERENTELKFR MWLFPYLTWA VIIFIAGALA
VMMYTPEHRA EVSSTLGLAI VISFLGIVTS RGHAQPVGAR SMG
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