| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4762 |
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| Symbol | |
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| ID | 5872576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5326768 |
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| End bp | 5328312 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641549900 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001670984 |
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| Protein GI | 167035753 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCC CTTCAGCACG CTTTACCTTG CTTACCGCTT CCCTGGTCTG CGCCCTGATC
ATCCTCGACA CCAACATTGT CGCGGTCAGC CTGCCCAGTA TCGCGCGAGA CCTGTCCGGC
TCGTTCGCCG ACATCGAATG GGTAGTCAGC GCCTACCTGC TGGCCTTCGC CGCTTGCCTG
TTGCCCGCCG GTAGCCTGGC CGACCGCTTC GGCCGGCGGC GCATGCTGCT GCTCGGCCTG
GTGCTGTTCG GCGTGGCTTC GCTGGCCTGC GGTGCGGCGC CCAGCCTGCT GTTTCTCGAC
CTGGCCAGAG CCGCCAAGGG GGTAGGCGCT GCGTTGCTGC TTACCTCGGC CCTGGCGGCG
ATTGGCAACC GGTACCATCA GCCACAAGAA CGCATGCGTG CCTGGGCCTT CTGGGGCGCC
TGCATGGGCG CCACCATCAC CTTCGCGCCG CTGCTGGGCG GGGTGATTGC CAGTACCTTG
GGCTGGCGCT GGATCTTCTA CATCAACCTG CCGCTGGTGG CACTGCTGGC GGTAATGGTC
ATGCGCAGTA TCGAAGAGTC TCGCGACAGT GCGGCGGCAC GCCTGGACCC CTGGGGCAGC
CTGACCTTCG CCGGCAGCCT GGGCTACCTG ATCTGGGCGA TGATCGATGC CAACCAGGTG
GGCTGGGGCA GCGCGCAAAC CCTTGGCCGG TTGGTGATCA GCGCCTTTCT GTTCAGCCTG
TTCATCATGG TCGAGCGCAG CCAGCAGCGG CCGATGATCG ACTTGCAACT GATGCGTAGC
GGGCGTTTTG TAGGGGCTCT GCTGGGCATG TTTGCCTACG CCGCCTGCGC CCAGGTGATG
ATGACCCTGC TGCCGCTGTA TTTGCAGAAC GGCCTGCAAC TGTCGGCCCT GGCCGCGGGG
GCGGGTATGT TGCCGTTCGC CGTTGCCATG CTGCTGACGC CGCGCCTGGG CATGCGCCTG
GCTGCCCACT GCAGCCCGGC GCAGGTGTTT GCGCTGGGCC TGGTGCTGGT GGGCACGGGC
AACTTGCTGT GTGCCTGGGC CACGCGCCAC GGCGGTTATG GGGCATTCGC CCTGGCCAGC
GTGGTGTTGG GGGCGGGCGC CGGGCTGCTC AATGGCGATA CGCAGAAAAA CATCATGGCC
TGCGTACCGC GTGAGCGTAC CGGTATGGCC TCGGGCCTGA GCACCACCAC GCGGTTTGGT
GCGATCGTGC TGGCCGTTGG TGTGCTCGGG GGTGTGCTCG CTGCCCGTAG CGGGCAGTTG
CTGCAGGAGG CCATGGCCAC TGTGGCACCC GCACAATCGA GCCAGGTTGC CGCGATGGCC
AGGCGGGTTG CAGCGGGCGA CTTGCAGGCG GCGCTGGCCC TGCTTGAGCC AGGCTTGCGT
GAGGCGGTGG CGCCATTGGC CCGCCAGGCA TTCATGGGCG GTTTCGAGGC TGTGTTACAG
GTCGCGGGTG TGGCGGCGTT GCTGTTTGCG CTGCTGGTCG GCGTGTTGCT GAGCCGGCCA
CTGCCTGCCA TGCAGGAGGG GCTGATGGCC GAAGGGCGAC CTTGA
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| Protein sequence | MPAPSARFTL LTASLVCALI ILDTNIVAVS LPSIARDLSG SFADIEWVVS AYLLAFAACL
LPAGSLADRF GRRRMLLLGL VLFGVASLAC GAAPSLLFLD LARAAKGVGA ALLLTSALAA
IGNRYHQPQE RMRAWAFWGA CMGATITFAP LLGGVIASTL GWRWIFYINL PLVALLAVMV
MRSIEESRDS AAARLDPWGS LTFAGSLGYL IWAMIDANQV GWGSAQTLGR LVISAFLFSL
FIMVERSQQR PMIDLQLMRS GRFVGALLGM FAYAACAQVM MTLLPLYLQN GLQLSALAAG
AGMLPFAVAM LLTPRLGMRL AAHCSPAQVF ALGLVLVGTG NLLCAWATRH GGYGAFALAS
VVLGAGAGLL NGDTQKNIMA CVPRERTGMA SGLSTTTRFG AIVLAVGVLG GVLAARSGQL
LQEAMATVAP AQSSQVAAMA RRVAAGDLQA ALALLEPGLR EAVAPLARQA FMGGFEAVLQ
VAGVAALLFA LLVGVLLSRP LPAMQEGLMA EGRP
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