Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4747 |
Symbol | |
ID | 5872561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5306428 |
End bp | 5306904 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641549885 |
Product | DNA mismatch endonuclease Vsr |
Protein accession | YP_001670969 |
Protein GI | 167035738 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.727283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.973977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGATG TCCATACCCC GGAAGCCCGC TCTCGCAACA TGCGGGCTAT CCGAAACAAG GATACAAAGC CGGAGCTGCT GATACGGAAA GCTCTGCATG CCCGTGGTTT CCGCTACCGT CTCGGAGGTG CCGGTCTTCC TGGGCATCCT GATATCGTCT TGCCTAAATA CAGAACAGCC ATCTTCATTC ATGGCTGTTT CTGGCATGGC CACAATTGCA AGTATTTCAA GCTTCCGGCG ACACGCACCG AGTTCTGGGC TGGTAAAATC CGAAGCAACC AGGAGAGAGA TCAGCGCTCC ACTTCACTGT TAGTGGAGCA GGGCTGGAGT GTCTTAACTG TCTGGGAGTG TTCGCTCAAG CCATCAGGGC CAGGGGTTGA AGCGGTCCTG CATGAAATAG AGGGTGTGCT CGCGCAAAGC TTGAATGTTA GGGTGTCTCA ACTCTTGGTT ATTTCTGGGC TGACTTCAAA GATGTAA
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Protein sequence | MVDVHTPEAR SRNMRAIRNK DTKPELLIRK ALHARGFRYR LGGAGLPGHP DIVLPKYRTA IFIHGCFWHG HNCKYFKLPA TRTEFWAGKI RSNQERDQRS TSLLVEQGWS VLTVWECSLK PSGPGVEAVL HEIEGVLAQS LNVRVSQLLV ISGLTSKM
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