| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4703 |
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| Symbol | |
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| ID | 5872514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5255951 |
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| End bp | 5258887 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549839 |
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| Product | hypothetical protein |
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| Protein accession | YP_001670925 |
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| Protein GI | 167035694 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.113752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAAG GATTGACTCG CGCCACTGGC GCAATCGTGG CCCTGGTAGC CCTCTATAGC
CTGCTCGGCT TCCTTATTCT CCCCGGTGTC GCGCTGCGCA TCGCCAACCA GCAGTTGGCC
CAGTACGCGA CCGTGCCGGC CCACCTCGAG CGGATCGAAC TCAACCCCTT CAGCCTCGAG
CTGACGCTGT GGGGCCTGCA GATCGGCGAG CCGGGCAAAG AGCAAGTCGC GTTCGAGCGG
TTGTACGCCA ACCTCTCGCT CGACAGCCTG TGGACCAAAG CCCTGCATCT GGAAGCGGTC
GAACTCGACA AACCACGCAA CGAAGTCCTG TTCGCCAAGG ACGGGGCCCT CAACCTGACC
GGGTTGTTCA AGCTGCCCGC CAGTGAGGCC AAACCTGACG AGCCGCCCAG CGACCCGTTC
CCGTTGCGTA TTGGCAGCAT CAAGCTGGTC GACGGCTACC TGCACTTCGA GGACCAGCGC
CCTAGCGAGC CGATCGAATT CCTCTACGAC AACATGAACC TGGAGCTGAA AAACCTCAGC
ACCCTGCCCA ACGACAATGC CGACATGTCC CTGGTGGCCC TCGGCCCCAA CGGCGGGCGT
ATCGACTGGA AAGGCACCCT CAGCCTGGCG CCGATCGCCT CCGAAGGCAC GCTGAAGGTC
ACCGAAGGCA AGATGAAGGC GTTCTGGCCC TATGTCCGTG ACGCCGTGCC GCTGGTGCTG
GAAGACGGCG TGATCAGCCT CGACACCCAC TACAAGCTCA ACCTCGCCCA GCAGACCGAG
TTGCAACTGG ACAACGCCTC CGTGCGCATC GCGCCGTTCG CCATCAAGGC GCCGGATGGC
CGCCCGTTGG CACGCCTGGC CAGCCTGGAG GTGAGCGAAA CCTCTGTCGA TCTGGTCAAG
CAACTGGTCA CCGTGGGCAA GATCCGCAGC GAAAAACTGG AAACCTGGGC CGCACTGGAA
AAGGACGGCC AACTCGACTG GCAGAAGCTG TTCGCCAGCC AACCGGCCAA GGCCACGCCA
AAGGAAAAGG CCGAACCTGC CGCCGCCGAG CCTACGCCTG AAGAGAAAGC CGCCAAGGCG
CCCAGCAAGC CCTGGCAAGT GCTGCTCAAA GATGTGCAAC TGCGCAACTA CCTGGTGCAC
CTGGCGGACC GCAGCCAGAA AGAACCGGTA GCCTTGGACA TTGGCCCTCT CAACGCCGAC
CTGCAAGGTT TCGACAGCCT CAACCAGTCG CCCTTCACCC TCAAGCTCGA CACCGGCGTG
GGCAAGCAAG GCAAGCTGCA AGCGGCTGGC CAGGTCAACC TGGCGCCAAT TTGGGCCAAG
CTGGATGTGA GCACCCGTGA CATCGACCTG CGCGTGGCCC AAGCCTACAT CAGCCCGTTC
ATCCTGCTGG AGCTGCGCAG CGGCATGCTT TCCAGCGACC TCAAGGTATA CCTGAAGAAC
ACCGCGCCGC TGGCGTTCAA TGTCACCGGC AAGGCGCAAG TCAGCCAGTT GCACACCCTC
GACACCATCA AAAGCCGCGA CTTCGTCAAA TGGCAGCAAG TGAACGTCGA CGGCTTGTCC
TACGTGCACG GCGATGCACT GTCGATCGAC AAGGTAACCC TGCTGCAGCC CTATGCGCGT
TTCATCATCA ACGAAGACCG CACCACCAAC GTCAATGACC TGCTGATCCC ACAACCGGCC
GGCGCCCCGG CGAGCAACAC GTCAAAGCCG GCCTCGGCCA GCAGCGGCAA GCCACTGGGC
ATTCACATCG GCCAGATCGA CATCAACGAC GGCTCGGCCA ACTTCGCCGA CCTGTCGCTC
ACCCCCAACT TCGCCACGGC CATCCAGCAG CTCAATGGCC AGATCGGCAC CATCGACAAC
CGCAAGCCGC TGCCGGCCAA GGTGGACGTC AAGGGCAAGG TCGACCGCTA CGCACCGGTT
ACCATCAAGG GCGCTCTCAA CCCGTTCAAC CCGTTGGCCA GCCTGGACAT CGCCACCAGC
TTCAAGCGCG TCGAGCTGAC CACGTTGACG CCCTACTCCG GTAAATTTGC CGGCTTCCGC
ATCCGCAAAG GCCGGCTCAA CCTCGACCTG CACTACCTGA TCACCAACGG CCAGCTCAAG
GCCGAGAACA AGGTCGTGGT GGAGCAGCTG CAACTGGGTG AAAAAGTCGA CAGCCCGGAC
GCGGTCGACC TGCCGATCCG CCTGGCGGTG GCACTGCTTA AGGATACCGA GGGCAAGATC
TCGATCGAAC TGCCGGTCAC CGGCGACCTC AACAACCCGC AGTTCAGCGT GATGCCGATT
GTTTGGCAAA CCCTGCGTAA CCTGGTGCTG CGTGCGGCAC AGGCACCGTT CAAGTTCATT
GGTGGGCTGA TTAGCGGCGG GGGCGCGGAA GACCTCGGCA ACGTAGCGTT CGCCCCGGGT
TCCAGCGAAC TCAGCGGCGA TGCCCAGTCG TCCCTGGACA AACTGGCATC AGCACTTAAG
GAGCGCCCGG AACTGCGTCT GGAAATCGAA GGCACCAGCG CCCAGGCCAG TGATGGCCCG
CTGATCGCCC AGCAACGCCT GGAGCGTGAG TACCAGGCCA CCTGGTACAA GATCCTGCAG
CGCCGTGGCG ACAAAGTACC GGCCAATGCC TCGATGCTGG TGGTCGACGA CAGCGACAAG
CCGGCAATGC TTGAGGGCAT CTATCGCACT CGCCTTAAAC AGCAGCCGCC TGCCGAATGG
GAGCAACTGG GCCGCGACGA GCGCACCGCC AAGCTGCGCG AGGCTGTGAT CAAGTCCTGG
GCAGAGAGCA CCGCACTGCT GCGTACCTTG GGCCAGGAGC GGGCCAGCAG TATCAAGGAT
TACCTAGTGG ACAAGGGCAA GCTGGAAGAT GACCGGGTGT ATTTCATCGA TACCAGCCTG
GGGCAGCCTG AAAGCGATGG CCGGGTGGTG ACGCCGATGC ATCTGGATGC CGAATAA
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| Protein sequence | MYKGLTRATG AIVALVALYS LLGFLILPGV ALRIANQQLA QYATVPAHLE RIELNPFSLE
LTLWGLQIGE PGKEQVAFER LYANLSLDSL WTKALHLEAV ELDKPRNEVL FAKDGALNLT
GLFKLPASEA KPDEPPSDPF PLRIGSIKLV DGYLHFEDQR PSEPIEFLYD NMNLELKNLS
TLPNDNADMS LVALGPNGGR IDWKGTLSLA PIASEGTLKV TEGKMKAFWP YVRDAVPLVL
EDGVISLDTH YKLNLAQQTE LQLDNASVRI APFAIKAPDG RPLARLASLE VSETSVDLVK
QLVTVGKIRS EKLETWAALE KDGQLDWQKL FASQPAKATP KEKAEPAAAE PTPEEKAAKA
PSKPWQVLLK DVQLRNYLVH LADRSQKEPV ALDIGPLNAD LQGFDSLNQS PFTLKLDTGV
GKQGKLQAAG QVNLAPIWAK LDVSTRDIDL RVAQAYISPF ILLELRSGML SSDLKVYLKN
TAPLAFNVTG KAQVSQLHTL DTIKSRDFVK WQQVNVDGLS YVHGDALSID KVTLLQPYAR
FIINEDRTTN VNDLLIPQPA GAPASNTSKP ASASSGKPLG IHIGQIDIND GSANFADLSL
TPNFATAIQQ LNGQIGTIDN RKPLPAKVDV KGKVDRYAPV TIKGALNPFN PLASLDIATS
FKRVELTTLT PYSGKFAGFR IRKGRLNLDL HYLITNGQLK AENKVVVEQL QLGEKVDSPD
AVDLPIRLAV ALLKDTEGKI SIELPVTGDL NNPQFSVMPI VWQTLRNLVL RAAQAPFKFI
GGLISGGGAE DLGNVAFAPG SSELSGDAQS SLDKLASALK ERPELRLEIE GTSAQASDGP
LIAQQRLERE YQATWYKILQ RRGDKVPANA SMLVVDDSDK PAMLEGIYRT RLKQQPPAEW
EQLGRDERTA KLREAVIKSW AESTALLRTL GQERASSIKD YLVDKGKLED DRVYFIDTSL
GQPESDGRVV TPMHLDAE
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