| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4689 |
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| Symbol | |
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| ID | 5872500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5238227 |
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| End bp | 5238940 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549825 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_001670911 |
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| Protein GI | 167035680 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.714813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000000556866 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTTTCT TTCCCCCTCT TGAACAGGGC CGCCTGCTGC GCCGCTACAA GCGCTTTCTG
GCCGATATCG AACTGACCAG CGGCGAGCAG ATGACCATCC ACTGCCCGAA CACCGGTTCC
ATGCTCAACT GCATGCGTGA AGGCGGGCTG GTGTGGTTCA GCCGCTCCAA CGACCCCAAG
CGCAAGCTGC CGGGCACCTG GGAGATCAGC GAAACCCCAC AAGGGCGGCT GGCCTGTGTG
AATACTGGGC GGGCCAATGC GCTGGTCGAA GAGGCGCTGC GGGCCGGCAC CATCGCCGAG
TTGGCCGGCT TTACCGCGCT CAAGCGTGAA GTGGCCTATG GCGAGGAAGG CAGCCGCATC
GACTTTCGTT TGGAGTTCGA CGGGGCCCCG GTTTATGTCG AGGTCAAGAG CGTGACCCTG
GGCTACCCCG ACACTGCAGT CGCAGCCTTT CCCGATGCGG TGACGCAGCG CGGTGCCAAG
CATTTGCGCG AGCTGGCGAA GTTGGCGCGG CAGGGGGTGC GGGCGGTGCA GCTGTATTGC
GTGAACCTGA CCGATGTAGA AGCCGTGCGC CCGGCCGAGG AAATCGATGC GGCGTATGCC
CAGGCGCTGC GTGCCGCTGT GGCGGATGGG GTGGAGGTGC TGGCCTACGG CACCCGGTTG
GATGCCGAAG GCATCGTCAT CGACCGCCGC TTGCCAGTGC TGCTTAACCC TTGA
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| Protein sequence | MRFFPPLEQG RLLRRYKRFL ADIELTSGEQ MTIHCPNTGS MLNCMREGGL VWFSRSNDPK
RKLPGTWEIS ETPQGRLACV NTGRANALVE EALRAGTIAE LAGFTALKRE VAYGEEGSRI
DFRLEFDGAP VYVEVKSVTL GYPDTAVAAF PDAVTQRGAK HLRELAKLAR QGVRAVQLYC
VNLTDVEAVR PAEEIDAAYA QALRAAVADG VEVLAYGTRL DAEGIVIDRR LPVLLNP
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