Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4669 |
Symbol | |
ID | 5872477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5206518 |
End bp | 5207084 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641549802 |
Product | hypothetical protein |
Protein accession | YP_001670891 |
Protein GI | 167035660 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0865446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTGG CCGCAAGGCG AGTGACAAGC TGTGCGCTTT CGCTATTGCT GGCCGCCCTG TTCCTTTACA CAGGCCCTGC CCAGGCAGAC TCCGCCACAA CCGCCGCTCG GGCTCAACAA CGCGCCCAGG CAGTCACCCA GGTCGTATTG GGTATCTTCA GCTACGCCCG CTGGCCTATA GAACCCTCAC CCTTGCGCTT GTGCCTGGTC GGTCCGACCG AATACGCCGA TGACCTGATC AAAGGCCATG TCCAGGAATC CGGTCGCCCC CTGCAGGTGC GGCGCCTGTT GGCAGAAGAT ACCCAGGTCG CCCAGGCCTG CGATGCCATC TATATCGGCA AGCTTGACCA GGGCCAGCGC GACCAGCTGT TCCAGCGTGT CAGGGGCCAT CCGGTGTTGA GCATCAGCGA GGCGGATGAC CCCTGCACGG TCGGCAGCCT GTTCTGCCTG CGGGTCAGCG ACCAGCAGGT GGCCTTTGAT GTCAACCTCG ACTCGGTGGC GCGCTCTGGC GTGCGTATTC ATCCCAGTGT GTTGCAATTG TCGCGTCGCC GGGCGGTGCA GCCATGA
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Protein sequence | MHVAARRVTS CALSLLLAAL FLYTGPAQAD SATTAARAQQ RAQAVTQVVL GIFSYARWPI EPSPLRLCLV GPTEYADDLI KGHVQESGRP LQVRRLLAED TQVAQACDAI YIGKLDQGQR DQLFQRVRGH PVLSISEADD PCTVGSLFCL RVSDQQVAFD VNLDSVARSG VRIHPSVLQL SRRRAVQP
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