| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4650 |
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| Symbol | |
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| ID | 5872458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5188115 |
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| End bp | 5188720 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641549783 |
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| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
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| Protein accession | YP_001670872 |
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| Protein GI | 167035641 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.760932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCG AACTGCTGCC GGAAACCCCT TCGCAGACTG CCGGCCCCTA CGTGCACATC
GGCCTGGCCC TGGAAGCGGC CGGCAACCCG ACCCGCGACC AGGAAATCTG GAACCGCCTG
GCCAAGCCTG ACGCGCCGGG CGAGCACATT CTGCTGATCG GCCAGGTGTA CGACGGTAAC
GGCCACCTGG TGCGCGATTC GTTCCTGGAA GTGTGGCAGG CAGATGCCAA CGGCGAGTAC
CAGGATGCCT ACAACCTGGA AAACGCCTTC AACAGCTTTG GCCGCACCGC TACCACCTTC
GATGCCGGTG AGTGGACGCT GCACACGGTC AAGCCGGGTG TGGTGAACAA CGCTGCTGGC
GTGCCAATGG CGCCGCACAT CAACATCAGC CTGTTTGCCC GTGGCATCAA CATTCACCTG
CACACGCGCC TGTATTTCGA TGATGAGGCC CAGGCCAATG CCAAATGCCC GGTGCTCAAC
CTGATCGAAC AGCCACAGCG GCGTGAAACC TTGATTGCCA AGCGTTGCGA AGTGGATGGG
AAGACGGCAT ATCGCTTTGA TATCCGTATT CAGGGGGAAG GGGAGACAGT CTTCTTCGAC
TTCTGA
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| Protein sequence | MPIELLPETP SQTAGPYVHI GLALEAAGNP TRDQEIWNRL AKPDAPGEHI LLIGQVYDGN
GHLVRDSFLE VWQADANGEY QDAYNLENAF NSFGRTATTF DAGEWTLHTV KPGVVNNAAG
VPMAPHINIS LFARGINIHL HTRLYFDDEA QANAKCPVLN LIEQPQRRET LIAKRCEVDG
KTAYRFDIRI QGEGETVFFD F
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