Gene PputGB1_4639 details

Gene Information

• Locus tag: PputGB1_4639
• Symbol: mscL
• ID: 5872447
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida GB-1
• Kingdom: Bacteria
• Replicon accession: NC_010322
• Strand: +
• Start bp: 5177317
• End bp: 5177736
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641549772
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001670861
• Protein GI: 167035630
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGCATGC TCAACGAGTT CAAGGCTTTC GCGGTCAAAG GCAATGTCGT CGACATGGCG 
GTCGGTATCA TCATCGGCGC GGCCTTCGGC AAGATCGTCT CGTCCTTCGT CGGTGACGTG 
ATCATGCCAC CACTGGGCCT GCTGATCGGT GGTGTGGACT TCAGCGACCT GGCCATTACC 
CTGAAGGCTG CCGAAGGTGA CGTACCAGCG GTAGTGCTGG CGTATGGCAA GTTCATCCAG 
ACCGTGATCG ACTTCGTGAT CGTGGCCTTT GCCATCTTCA TGGGGGTGAA GGCGATCAAC 
AGGCTCAAGC GTGAGGAAGC CGTGGCGCCG ACTACGCCGC CGGTGCCTTC GGCTGAAGAG 
ACACTGCTGA CCGAGATTCG CGACTTGCTC AAGACGCAGA ATCAGAATCG CTTGCCGTGA 

 

Protein sequence

MGMLNEFKAF AVKGNVVDMA VGIIIGAAFG KIVSSFVGDV IMPPLGLLIG GVDFSDLAIT 
LKAAEGDVPA VVLAYGKFIQ TVIDFVIVAF AIFMGVKAIN RLKREEAVAP TTPPVPSAEE 
TLLTEIRDLL KTQNQNRLP