Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4612 |
Symbol | |
ID | 5872420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5152113 |
End bp | 5152568 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549745 |
Product | flavodoxin |
Protein accession | YP_001670834 |
Protein GI | 167035603 |
COG category | [C] Energy production and conversion |
COG ID | [COG0716] Flavodoxins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.263285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTCG TCATTATTTC CGGATCGGTC TACGGCACCG CCGAAGAAGT CGCACGTCAC GCTGAATCGC TGCTCAAGGC AGCGGGGCTG GAGGCCTGGC ATGCGGCCCG CGCCACCCTT CAGGATCTTC AAGGCTTTGC CCCCGACGCC TTGCTGGCCG TGACCTCGAC CACCGGCATG GGCGAGCTGC CGGACAACCT CATGCCGCTG TACAGCGCCA TTCGTGACAC CCTGCCTGCG GCCTGGCGCG GCCTGCCGGG CGCAGTGATT GCGCTGGGCG ATTCCAGCTA TGGTGACACC TACTGTGGTG GTGGCGAGCA GATGCGCGAG CTGTTTGCCG AGCTGGGCGT GCGCGAAGTG CAGCCGATGC TGCGCCTGGA TGCGAGCGAG ACAGTGACCC CGGAGGCAGA TGCCGAGCCG TGGTTGGCTG AGTTGGCGAG TGCCTTCAAA GCCTGA
|
Protein sequence | MKVVIISGSV YGTAEEVARH AESLLKAAGL EAWHAARATL QDLQGFAPDA LLAVTSTTGM GELPDNLMPL YSAIRDTLPA AWRGLPGAVI ALGDSSYGDT YCGGGEQMRE LFAELGVREV QPMLRLDASE TVTPEADAEP WLAELASAFK A
|
| |