| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4605 |
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| Symbol | |
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| ID | 5872413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5145441 |
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| End bp | 5146742 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549738 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_001670827 |
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| Protein GI | 167035596 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0198539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCG ACACCTCACC CGACCTTCAC TACCTCAGCG GCTTCGGCAA CGAGTTTGCC
AGCGAAGCGC TGCCAGGGGC CTTGCCGGTC GGGCAGAACT CGCCACAGAA GGCACCCTAT
GGGCTGTATG CCGAGCTGCT CTCGGGCACG GCGTTCACCA TGGCCCGCAG CGAGCTGCGT
CGCACCTGGC TGTATCGCAT TCGCCCGTCT GCCTTGCACC CTCGTTTCGA GCGCCTGGCG
CGTCAGCCGC TGAGCGGGCC GCTGGGGGGC ATCAACCCCA ACCGCCTGCG TTGGAGCCCA
CAGCCGATTC CCGCCGAACC GACCGATTTC ATCGAGGGCT GGTTGCCCAT GGTGGCCAAC
GCCGCAGCGG AAAAACCGGC TGGCGTGAGC ATCTACATCT ACCGCGCCAA CCGTTCCATG
GAGCGGGTGT TCTTCAACGC CGACGGTGAA CTTTTGCTGG TACCGGAACA GGGCCGCCTG
CGCATTGCCA CTGAACTGGG CGTAATGGAA GTCGAGCCGC TTGAAATTGC GGTGATCCCG
CGTGGCATGA AGTTCCGTGT GGAACTGCTC GACGGCCAGG CCCGTGGCTA CATCGCCGAA
AACCACGGCG CGCCGCTGCG TATTCCAGAC CTGGGCCCGA TCGGCAGCAA TGGCCTGGCC
AACCCACGCG ATTTCCTCAC CCCGGTGGCG CACTACGAAG AGGCCGAAGC GCCGGTGCAA
CTGGTGCAGA AATTCCTGGG CGAACACTGG GCTTGCGAGC TGCAGCACTC GCCGCTGGAC
GTGGTGGCCT GGCACGGCAG CAACGTGCCG TACAAATACG ACCTGCGCCG CTTCAATACC
ATCGGCACGG TCAGTTTCGA CCACCCGGAC CCTTCGATCT TTACCGTGCT GACCTCGCCG
ACCAGCGTGC ATGGCCTGGC CAACATGGAC TTCGTGATCT TCCCGCCACG CTGGATGGTG
GCCGAGAACA CCTTCCGCCC GCCATGGTTC CACCGCAACC TGATGAACGA GTTCATGGGC
TTGATCAATG GTGCCTACGA CGCCAAGGCC GAGGGCTTCC TGCCTGGCGG TGCCTCGCTG
CACGGCGTGA TGAGCGCCCA CGGCCCCGAC GCCGAAACCT GCGAAAAAGC CATTGCCGCC
GACCTGGCGC CGCACAAGAT CGACAACACC ATGGCCTTCA TGTTCGAGAC CAGCCAGGTG
CTGCGCCCGA GCCTGCAAGC CCTTGAATGC CCGCAATTGC AGGCCGACTA CGATAGTTGC
TGGGCAACCT TGCCAAGCAC CTTCAACCCG AACCGGAGAT AA
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| Protein sequence | MNRDTSPDLH YLSGFGNEFA SEALPGALPV GQNSPQKAPY GLYAELLSGT AFTMARSELR
RTWLYRIRPS ALHPRFERLA RQPLSGPLGG INPNRLRWSP QPIPAEPTDF IEGWLPMVAN
AAAEKPAGVS IYIYRANRSM ERVFFNADGE LLLVPEQGRL RIATELGVME VEPLEIAVIP
RGMKFRVELL DGQARGYIAE NHGAPLRIPD LGPIGSNGLA NPRDFLTPVA HYEEAEAPVQ
LVQKFLGEHW ACELQHSPLD VVAWHGSNVP YKYDLRRFNT IGTVSFDHPD PSIFTVLTSP
TSVHGLANMD FVIFPPRWMV AENTFRPPWF HRNLMNEFMG LINGAYDAKA EGFLPGGASL
HGVMSAHGPD AETCEKAIAA DLAPHKIDNT MAFMFETSQV LRPSLQALEC PQLQADYDSC
WATLPSTFNP NRR
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