| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4595 |
|---|
| Symbol | |
|---|
| ID | 5872403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 5136248 |
|---|
| End bp | 5137174 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641549728 |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_001670817 |
|---|
| Protein GI | 167035586 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCCT CGTTCTCTGC GCAGGTTGCG GAGCAGGCCG TGCACTGGCT GATCGAATCT
CAGGGCGATG ACTTCGGCCA GGTACAGCAA CTGGCGCTTG AGCATTGGCT CCAGGCCAAC
CAGGAGCACC AGCGAGCCTG GGCCCATATC CAGCAGGTCA ACCAGCGGCT GCGCGGTGTG
TCGTCGCCCG TGGTGCATGC AACGCTGCAA GCCCCGCCTT CGCCGGCCAG GCGCCGGGCA
CTCAAGGCGT TGCTGTTGGT CGGTGTGGCG AGTGCCACCG GGCTTGGCCT GCAACAGCAC
AATCCGCTGC CTGGGTTGAT GGCCGACTAC CGTAGCCCGC TCGGCCAGCG TCGGCGCATG
CAGCTGGTTG ATGGCAGCGT GCTGCAACTC AATACCCGCA GTGCCGCAGA CGCGCGCTTC
GACAGCCAGC AGCGACTGCT GCGTCTGTTC GAAGGTGAAC TGGCGTTGCA AGTGGCCAGC
GATGCACGGC CATTGCTGTT GCGCACCGCT GAAGGGGCGC TGCGCCTGGA CAGCGGGCGC
TTCAACGTGC GCCAGTTCGA CGGTTACAGC CTGGTATCGG TATTCCAGGG GGCTGCCAGC
GCGGCTGGGC AGCCACTGCG GGCCGGGCAA CAGGCCCGCT TCACCGGCGC CTGGCGATCG
GTGACGCCGC TCGACCCTAA TGTCGGGGCC TGGGTAGACG GCATGCTGGT GGCGTCGCAG
ATGCGCCTGG CGGACTTTCT TGCCGAACTT GGGCGCTATC GCCATGGGCA GTTGGGGTGT
AGCGAGCAGG TTGCCGACTT GCGTATTTCT GGATCGTATC CGCTGGATGA CAGTGAACGC
ATCCTGCAGA TGCTGGAGGT GGCGCTACCG GTGCGGGTGC GACGGTTCAC CCGGTACTGG
GTGACGGTCG AGCCGAAGAT CGGGTAG
|
|---|
| Protein sequence | MNASFSAQVA EQAVHWLIES QGDDFGQVQQ LALEHWLQAN QEHQRAWAHI QQVNQRLRGV
SSPVVHATLQ APPSPARRRA LKALLLVGVA SATGLGLQQH NPLPGLMADY RSPLGQRRRM
QLVDGSVLQL NTRSAADARF DSQQRLLRLF EGELALQVAS DARPLLLRTA EGALRLDSGR
FNVRQFDGYS LVSVFQGAAS AAGQPLRAGQ QARFTGAWRS VTPLDPNVGA WVDGMLVASQ
MRLADFLAEL GRYRHGQLGC SEQVADLRIS GSYPLDDSER ILQMLEVALP VRVRRFTRYW
VTVEPKIG
|
|---|
| |