| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4594 |
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| Symbol | |
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| ID | 5872402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5135757 |
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| End bp | 5136251 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549727 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001670816 |
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| Protein GI | 167035585 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCAGCG CGCTCTCTTC CACGGTCGAA GGCCTTTACC ACGCCCATCA CAACTGGCTC
ACCAGCTGGT TGCGCCGCCG CCTGGGCTGC CCGCAGAGTG CCGCCGACCT GGCCCAGGAC
ACCTACCTGC GCCTGCTGCA GGCCCGCGAA ACACCGCAAC TGATCGAACC TCGCGCATTT
CTCGCCACCG TGGCCAAGCG TGTGTTGTGC AACCACTTCC GCCGCCAGGA GCTGGAGCGC
GCTTACTTGC AGGCCCTGGC CCAAATACCG GAAGAAGTGG CACCCAGTGA GGAGCAGAAG
GCGATCATCT TCGAGACCCT GCTGGAACTC GACCGCCTGC TGGACGGCCT GCCTCCATTG
GTCAAACGTG CCTTCCTGTT GGCCCAGGTC GACGGCCTTG GCCAAGGCGA AATCGCCCGT
GAGCTGGGCA TTTCCCTGGC CACGGTAAAA CGCTACCTGA GCAAGGCAGC CATGCGCTGT
TACTTTGCCC TGTGA
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| Protein sequence | MPSALSSTVE GLYHAHHNWL TSWLRRRLGC PQSAADLAQD TYLRLLQARE TPQLIEPRAF
LATVAKRVLC NHFRRQELER AYLQALAQIP EEVAPSEEQK AIIFETLLEL DRLLDGLPPL
VKRAFLLAQV DGLGQGEIAR ELGISLATVK RYLSKAAMRC YFAL
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