| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4585 |
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| Symbol | |
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| ID | 5872393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5126194 |
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| End bp | 5127168 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549718 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001670807 |
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| Protein GI | 167035576 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.177962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CTGTCCTGGC CTTCAGCCGT ATCACCCCGG CCATGGCCGA GCGCCTGCAG
CAAGACTTCA ACGTGATTCT GCCCAACCCC AAGCTCGGCG ACATCAACGC CCAGTTCAAC
GAAGCCCTGC CCGAGGCCCA CGGCCTGATC GGCGTTGGCC GCAAGCTGGG CCGTGCACAG
CTTGAAGGCG CGGCCAAGCT GGAGGTGGTG TCCAGTGTTT CGGTCGGCTA TGACAACTAC
GACTTGGACT ACTTCAACGA ACGCGGCATC GCCCTGACCA ACACCCCCGA CGTGCTCACC
GAAAGCACCG CCGACCTGGG CTTCTCGCTG ATCATGGGCT GTGCCCGCCG CACCGCCGAA
CTGGATGCCT GGACCAAGGC CGGCAACTGG CAGGCCACCG TAGGCCCGGC CCATTTCGGC
AGCGATGTGC ATGGCAAGAC GCTGGGTATC GTCGGCATGG GCAACATCGG CGCTGCCATT
GCCCGCCGCG GCCGGTTCGG TTTCAACATG TCGGTCATCT ACGCTGGCAA CAGCCGCAAG
ACCGCGCTGG AGCAAGAACT TGGGGCGCAG TTGCGCAGCC TGGAGCAGTT GCTGGCCGAA
GCGGACTTCG TGGTCATTGT GGTGCCGTTG TCCGACGCCA CCCGCAAGCT GATTGGCGCC
CGCGAGCTGA AACTGATGAA GCCGAGTGCC TTCCTGATCA ACATCGCTCG CGGGCCGGTG
GTGGATGAAG CGGCGCTGAT CGAAGCCCTG CAGAACGGTA CCCTTCGTGG GGCTGGTCTG
GATGTGTACG AGAAGGAGCC GCTGAGCGAT TCGCCGCTGT TCAAGCTGCC CAATGCGCTG
ACCTTGCCGC ACATTGGTTC GGCCACTGCC GAAACCCGAT TGGCCATGGC CAATCGGGCG
ATGGACAACC TGCGCGCGGC GCTGCTGGGC GAGCGGCCGC GGGACCTGGT GAACCCGCAG
GTGTGGAAGG GCTGA
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| Protein sequence | MKKTVLAFSR ITPAMAERLQ QDFNVILPNP KLGDINAQFN EALPEAHGLI GVGRKLGRAQ
LEGAAKLEVV SSVSVGYDNY DLDYFNERGI ALTNTPDVLT ESTADLGFSL IMGCARRTAE
LDAWTKAGNW QATVGPAHFG SDVHGKTLGI VGMGNIGAAI ARRGRFGFNM SVIYAGNSRK
TALEQELGAQ LRSLEQLLAE ADFVVIVVPL SDATRKLIGA RELKLMKPSA FLINIARGPV
VDEAALIEAL QNGTLRGAGL DVYEKEPLSD SPLFKLPNAL TLPHIGSATA ETRLAMANRA
MDNLRAALLG ERPRDLVNPQ VWKG
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