Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4574 |
Symbol | |
ID | 5872382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5113387 |
End bp | 5114199 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641549707 |
Product | short chain dehydrogenase |
Protein accession | YP_001670796 |
Protein GI | 167035565 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.582259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTG TCCTGATCAC AGGTTGTTCC AGCGGCATCG GCCGCGCCTT GGCCGATGCT TTTCGCGATG CCGGCCACCA CGTCTGGGCC ACTGCCCGCA AGCCTGAAGA TGTCGAGCAA CTGAGCGCCG CCGGCTACAC CGCCCGGCAG TTGGATGTGA ACGACGGCGA GGCGCTGGCC CGCTTGGCCG ACGAACTGGA AAGCCTCGAC ATCCTGATCA ACAACGCCGG ATACGGCGCC ATGGGCCCGT TGCTCGATGG CGGCGTGGAT GCCCTGCGCC AGCAGTTCGA AACCAACGTC TTCGCCGTAG TCGGCGTTAC CCGTGCGCTG TTCCCGCTGC TACGCCGCTC ACGGGGCCTG GTGGTGAACA TCGGCAGCGT CTCCGGTGTG CTGGTCACGC CATTCGCCGG TGCCTACTGC GCCTCGAAAG CCGCCGTGCA TGCGCTGAGC GATGCCTTGC GCCTGGAGCT GGCGCCGTTC GGTGTGCAGG TAATGGAAGT GCAGCCTGGG GCAATTGCCA CGCAGTTCGC CAGCCATGCC CAGCGCCAGG CCGAGCAGGT GCTGGCGGCG GATTCACCGT GGTGGCCGCT GCGCGAGCAT GTGCAGGCAC GGGCGCGGGC TTCGCAGGAC AGGCCGACTT CGGCGGCGGT GTTTGCCCGG GGGGTGTTGG CGGCAGTCGG CAAGTCGCCG GTACCGGGGG TGGTGCGGTT GGGCAATGGC AGTACCGCGC TGCCGCTGAT GGCCCGGTTG CTGCCACGGC GGTTGCTGGA CTGGGCGTTA CGCAAGCGCT TTGGGCTGCT GCGGCCGCTC TGA
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Protein sequence | MPTVLITGCS SGIGRALADA FRDAGHHVWA TARKPEDVEQ LSAAGYTARQ LDVNDGEALA RLADELESLD ILINNAGYGA MGPLLDGGVD ALRQQFETNV FAVVGVTRAL FPLLRRSRGL VVNIGSVSGV LVTPFAGAYC ASKAAVHALS DALRLELAPF GVQVMEVQPG AIATQFASHA QRQAEQVLAA DSPWWPLREH VQARARASQD RPTSAAVFAR GVLAAVGKSP VPGVVRLGNG STALPLMARL LPRRLLDWAL RKRFGLLRPL
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