Gene PputGB1_4574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4574 
Symbol 
ID5872382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5113387 
End bp5114199 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content68% 
IMG OID641549707 
Productshort chain dehydrogenase 
Protein accessionYP_001670796 
Protein GI167035565 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.582259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACTG TCCTGATCAC AGGTTGTTCC AGCGGCATCG GCCGCGCCTT GGCCGATGCT 
TTTCGCGATG CCGGCCACCA CGTCTGGGCC ACTGCCCGCA AGCCTGAAGA TGTCGAGCAA
CTGAGCGCCG CCGGCTACAC CGCCCGGCAG TTGGATGTGA ACGACGGCGA GGCGCTGGCC
CGCTTGGCCG ACGAACTGGA AAGCCTCGAC ATCCTGATCA ACAACGCCGG ATACGGCGCC
ATGGGCCCGT TGCTCGATGG CGGCGTGGAT GCCCTGCGCC AGCAGTTCGA AACCAACGTC
TTCGCCGTAG TCGGCGTTAC CCGTGCGCTG TTCCCGCTGC TACGCCGCTC ACGGGGCCTG
GTGGTGAACA TCGGCAGCGT CTCCGGTGTG CTGGTCACGC CATTCGCCGG TGCCTACTGC
GCCTCGAAAG CCGCCGTGCA TGCGCTGAGC GATGCCTTGC GCCTGGAGCT GGCGCCGTTC
GGTGTGCAGG TAATGGAAGT GCAGCCTGGG GCAATTGCCA CGCAGTTCGC CAGCCATGCC
CAGCGCCAGG CCGAGCAGGT GCTGGCGGCG GATTCACCGT GGTGGCCGCT GCGCGAGCAT
GTGCAGGCAC GGGCGCGGGC TTCGCAGGAC AGGCCGACTT CGGCGGCGGT GTTTGCCCGG
GGGGTGTTGG CGGCAGTCGG CAAGTCGCCG GTACCGGGGG TGGTGCGGTT GGGCAATGGC
AGTACCGCGC TGCCGCTGAT GGCCCGGTTG CTGCCACGGC GGTTGCTGGA CTGGGCGTTA
CGCAAGCGCT TTGGGCTGCT GCGGCCGCTC TGA
 
Protein sequence
MPTVLITGCS SGIGRALADA FRDAGHHVWA TARKPEDVEQ LSAAGYTARQ LDVNDGEALA 
RLADELESLD ILINNAGYGA MGPLLDGGVD ALRQQFETNV FAVVGVTRAL FPLLRRSRGL
VVNIGSVSGV LVTPFAGAYC ASKAAVHALS DALRLELAPF GVQVMEVQPG AIATQFASHA
QRQAEQVLAA DSPWWPLREH VQARARASQD RPTSAAVFAR GVLAAVGKSP VPGVVRLGNG
STALPLMARL LPRRLLDWAL RKRFGLLRPL