Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4558 |
Symbol | |
ID | 5872366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5092083 |
End bp | 5093477 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549691 |
Product | PhoH family protein |
Protein accession | YP_001670780 |
Protein GI | 167035549 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.570751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGACC AAGGACGCAA CCCTTCCTCC AGCAAGCCAA TCCTCTATGT GCTCGATACC AACGTCCTGA TTCACGACCC CAACGCGTTA CTGAACTTCG AGGAGCACCA TGTCGCCATT CCGATGACGG TGCTGGAGGA ACTCGACAAG CTCAAGACCG GTAAACAGAC CATCGCCGCC GAATGCCGGC AGGCCATCCG CCTGATCGAC CAGACCCTTG GTGACGCTTC GCCTAGCGAT GTCGAGCAGG GCGTGCCGAT CCAGCGCAAC AAAAGCGGGC CCAAGGGCTT CCTGTCGATC CTGATGAGCC CGCGCAACGA GCCCAGCAAG TTGCTGCCGG AAAACCTCAA CGACAACATC ATCATCAACA CCCTGCTCGA CGTACGCAGC CGGCGCACCG ACTTGGACGT GGTGCTGGTC ACCAAAGACA TCAACATGCG CCTGAAGGCG CGCGCCTGTG GCATTGCGGC CGAGGACTAC AGCACCGACC AGTTGGTCGA TGACGTGTCC TTGCTGTCCA AGGGTTACCA CTCGGTCACC GGCTCGTTCT GGGACCGCGT CAGCAAGGTC GATACCCGCC AGGAGCGTGG CCGTACCTGG CATCGGGTGC AGATGATCGA CAACTTGCCA GCCGTGCATA TCAACGAGTT CATCATCGAT GAGCAGGGCT TCGTCGGCTG GATCAAGGGC ATCCGCAACG ACGAACTGCT GCTGCTCGAC TTGCACCAGG AACCGCTGCT GCACCAGGAA GCCTGGGGCC TGAAACCACG CGACATCCAC CAAAGCCTGG CGCTGTTCGC CTTGCTCGAC CCGGATATCC ACCTGGTCAA CCTGACCGGC GCCGCAGGCT CCGGCAAGAC CATCCTGGCC CTGGCTGCGG CCATCGAGCA GACCATGGTC AGCAAGCGCT ACCGGCGCAT CATCGCCACC CGCAGCGTGC AGGGGCTGGA CCAGGAGATC GGCTTCCTGC CGGGTACCGA AGCGGAGAAA ATGGAGCCGT GGCTGGGCGC TATCACCGAC AACCTCGAAG CCTTGCACAT GGATGACGAA AGTACCCATG GCAGCGTCGA GTACATCCTC GAACGCGTGC CGTTGCAGTT CAAGTCGCTG AACTACATCC GTGGCCGCAG CTTCCAGCAA AGCCTGATCC TGATCGACGA GTGCCAGAAC CTGACGCCGC ACCAGATGAA AACCATCATT ACCCGTGCCG GCTCCGGTTC CAAGGTGGTC TGCCTGGGCA ACCTGGCGCA GATCGACACC CCCTACCTGT CCGCGACCAG CTCGGGCCTG ACCTACCTGA CCGAGCGTTT CAAGGACTTC CCCCACGGCG TGCACATCAC CCTGCAGGGC GTGCCACGCT CGGTGCTGGC CGAGTACGCC GAGTCGCATC TGTAA
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Protein sequence | MDDQGRNPSS SKPILYVLDT NVLIHDPNAL LNFEEHHVAI PMTVLEELDK LKTGKQTIAA ECRQAIRLID QTLGDASPSD VEQGVPIQRN KSGPKGFLSI LMSPRNEPSK LLPENLNDNI IINTLLDVRS RRTDLDVVLV TKDINMRLKA RACGIAAEDY STDQLVDDVS LLSKGYHSVT GSFWDRVSKV DTRQERGRTW HRVQMIDNLP AVHINEFIID EQGFVGWIKG IRNDELLLLD LHQEPLLHQE AWGLKPRDIH QSLALFALLD PDIHLVNLTG AAGSGKTILA LAAAIEQTMV SKRYRRIIAT RSVQGLDQEI GFLPGTEAEK MEPWLGAITD NLEALHMDDE STHGSVEYIL ERVPLQFKSL NYIRGRSFQQ SLILIDECQN LTPHQMKTII TRAGSGSKVV CLGNLAQIDT PYLSATSSGL TYLTERFKDF PHGVHITLQG VPRSVLAEYA ESHL
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