| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4533 |
|---|
| Symbol | rpsI |
|---|
| ID | 5872341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5069105 |
|---|
| End bp | 5069497 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641549666 |
|---|
| Product | 30S ribosomal protein S9 |
|---|
| Protein accession | YP_001670755 |
|---|
| Protein GI | 167035524 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0103] Ribosomal protein S9 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.848049 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCGA CTCAAAATTA CGGCACTGGC CGTCGCAAGA CCGCAACCGC TCGCGTATTC
CTGCGTCCGG GTACTGGTAA CATTTCCATC AACAACCGTT CTCTGGACGT GTTCTTCGGT
CGCGAAACCG CTCGCATGGT TGTTCGCCAG CCACTCGAGC TGACCGAAAC CGTTGAGAAG
TTCGACATCT ACGTCACCGT TTCCGGTGGT GGTGTCAGCG GTCAAGCCGG TGCGATCCGT
CACGGTATCA CCCGCGCTCT GATGGAATAC GACGAAACCC TGCGTGGCGC TCTGCGTCGT
GCTGGCTACG TCACCCGCGA CGCTCGTGAA GTTGAGCGTA AGAAAGTGGG TCTGCGTAAA
GCGCGTAAGC GTCCTCAGTA CTCCAAGCGT TAA
|
|---|
| Protein sequence | MSATQNYGTG RRKTATARVF LRPGTGNISI NNRSLDVFFG RETARMVVRQ PLELTETVEK
FDIYVTVSGG GVSGQAGAIR HGITRALMEY DETLRGALRR AGYVTRDARE VERKKVGLRK
ARKRPQYSKR
|
|---|
| |