Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4470 |
Symbol | |
ID | 5872278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5001112 |
End bp | 5002107 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549605 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001670694 |
Protein GI | 167035463 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.578152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.10133 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATTC TGGTCACCGG CGCGAGTGGC TTCATTGGTG GGCGCTTTGC GCGCTTCGCC CTGGAGCAGG GCCTGGACGT GCGCGTCAGC GGCCGCCGTG CCGAAGGGGT GGAGCACCTG GTCAAGCGCG GCGCCCAGTT CATCCCCGGC GACCTGGGCG ATGCCGAGTT GGCCCGGCGT TTGTGCCAGG GCGTCGAGGC GGTGGTGCAC TGTGCAGGCG CGGTGGGCAA CTGGGGGCGT TATCAGGACT TCTACCAGGG CAACGTGGTG GTTACCGAGA ATGTGGTCGA GGGCTGCCTG AAAGAGCATG TACGGCGCCT GGTTCATCTG TCTTCGCCGT CGATCTATTT CAATGGCCGT TCACGCCTGG ACATCCGTGA AGACCAGGTG CCGCGCCGTT TCCACGACCA CTATGGGCAA ACCAAACACC TGGCCGAGCA GAAAGTGTTC GGTGCCCAGG AGTTCGGCCT CGAAGTATTG GCGCTGCGCC CGCGCTTCGT CACCGGCGCC GGCGATGCCA GCATTTTCCC GCGGCTGATG CAGATGCAGC GCAAAGGCCG TGTGGCGATC ATCGGCAATG GCCTGAACAA GGTCGATTTC ACCAGTGTGC ACAACCTCAA CGAGGCGCTG CTCAGTGCGC TGTTCGTTGA TGAACGGGCG CTGGGCCAGG CTTACAACAT CAGCAACGGG CAGCCGCTGC CGCTGTGGGA CGTGGTCAAC TACGTGATGC GCCAGATGCA GTTGCCACAG GTTACCCGCT ACCGTTCCTA CGGCCTGGCC TACAGCTTCG CCGCGCTGAA CGAGGCGGCT TGCATGCTGT GGCCAGGGCG CCCGCAACCG ACCTTGTCGC GCCTGGGCAT GCAGGTGATG AGCCGTGATT TCACCCTGGA TATCAGCCGC GCCCGGCAAT ACCTGGACTA CCAGCCCAAA GTCAGCCTGT GGACGGCGCT GGATGAATTC TGTGGCTGGT GGAAGCACTT GCCGCCGGGG CATTGA
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Protein sequence | MRILVTGASG FIGGRFARFA LEQGLDVRVS GRRAEGVEHL VKRGAQFIPG DLGDAELARR LCQGVEAVVH CAGAVGNWGR YQDFYQGNVV VTENVVEGCL KEHVRRLVHL SSPSIYFNGR SRLDIREDQV PRRFHDHYGQ TKHLAEQKVF GAQEFGLEVL ALRPRFVTGA GDASIFPRLM QMQRKGRVAI IGNGLNKVDF TSVHNLNEAL LSALFVDERA LGQAYNISNG QPLPLWDVVN YVMRQMQLPQ VTRYRSYGLA YSFAALNEAA CMLWPGRPQP TLSRLGMQVM SRDFTLDISR ARQYLDYQPK VSLWTALDEF CGWWKHLPPG H
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