Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4460 |
Symbol | |
ID | 5872268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4993254 |
End bp | 4993835 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549595 |
Product | YceI family protein |
Protein accession | YP_001670684 |
Protein GI | 167035453 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00111755 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCAAGC TGCCCCGTCT GTTACCCGCC TTGCTGCTGG CTTTGTGCCT GCCTGCCCAT GCCAATTGGC ACCTTGATGG CGAGTCTTCA CGCCTGTCGT TCATTACCGG CAAGAACGGC GACACCGCCG AAGTGCATCG CTTTCTGGTG TTGCACGGTA CGGTCGACCG CAAGGGTGTG GCGGGGTTGA GTATCGAGAT GGACTCGGTG AGCAGCGGCA TCCCGCTGCG TGACGAGCAG ATGCGCGACA ACCTGTTCGA GGTCGAGCGA TTTGCCGAGG CCACAGTGAA GGCACAGATC GACCTGCGGC CGATCAATGA CCTGGCCGAC GGTGCGCAGA TCGAGTTGCG CCTGCCGCTA ACGGTTACCC TGCATGGCCA GTCGCACAGC TACAACGCCC TGCTACTGGC CACCCGCCTG GATGCGCGGC GCTTCCAGGT TGTAACCCTC GAGCCGCTGC TGCTGCGTGC CGAGGATTTC GGCTTGCTGC CTGGGCTGGA AAGCCTGCGC AAGTTTGCCA AGTTGAAGTC CATCAACCCA TCGGTGCCGG TGAGTGCGGT GCTGATTTTC ACCGCTCGCT GA
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Protein sequence | MFKLPRLLPA LLLALCLPAH ANWHLDGESS RLSFITGKNG DTAEVHRFLV LHGTVDRKGV AGLSIEMDSV SSGIPLRDEQ MRDNLFEVER FAEATVKAQI DLRPINDLAD GAQIELRLPL TVTLHGQSHS YNALLLATRL DARRFQVVTL EPLLLRAEDF GLLPGLESLR KFAKLKSINP SVPVSAVLIF TAR
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