Gene PputGB1_4426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4426 
Symbol 
ID5872234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand- 
Start bp4953705 
End bp4954337 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content61% 
IMG OID641549561 
ProductTetR family transcriptional regulator 
Protein accessionYP_001670650 
Protein GI167035419 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.062473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.279059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGTC GAACCAAAGA AGAAGCCCAG GAAACCCGCG CCCAGATCAT CGAGGCGGCG 
GAAAAGGCCT TCTACAAGCG CGGGGTTGCG CGAACCACAC TGGCTGACAT CGCCGAACTC 
GCGGGTGTGA CGCGCGGGGC TATCTACTGG CACTTCAACA ACAAGGCCGA GTTGGTGCAG 
GCGTTGCTCG ACAGCCTGCA CGAGACCCAT GACCATTTGG CGCGGGCGAG CGAAAGCGAG 
GACGAACTCG ACCCGCTTGG CTGCATGCGC AAGCTGCTGT TGCAAGTGTT CAACGAGCTG 
GTGCTCGATG CCCGAACCCG GCGTATCAAT GAAATCCTGC ATCACAAGTG CGAGTTCACC 
GATGACATGT GTGAAATTCG CCAGCAGCGC CAGGGTGCGG TGCTGGATTG CCACAAGGGC 
ATCACCCTGG CGTTGGCCAA TGCCGTACGC CGGGGCCAGT TGCCTGGCGA GCTGGATGTC 
GAGCGCGCGG CGGTGGCCAT GTTCGCCTAT GTCGATGGCC TGATCGGGCG CTGGCTGCTG 
CTGCCTGACA GTGTCGATCT GTTGGGTGAT GTCGAAAAAT GGGTCGACAC CGGGCTGGAT 
ATGCTGCGCT TGAGCCCGGC GTTGCGCAAA TGA
 
Protein sequence
MVRRTKEEAQ ETRAQIIEAA EKAFYKRGVA RTTLADIAEL AGVTRGAIYW HFNNKAELVQ 
ALLDSLHETH DHLARASESE DELDPLGCMR KLLLQVFNEL VLDARTRRIN EILHHKCEFT 
DDMCEIRQQR QGAVLDCHKG ITLALANAVR RGQLPGELDV ERAAVAMFAY VDGLIGRWLL 
LPDSVDLLGD VEKWVDTGLD MLRLSPALRK