| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4392 |
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| Symbol | |
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| ID | 5872199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4917097 |
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| End bp | 4918386 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549526 |
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| Product | outer membrane porin |
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| Protein accession | YP_001670616 |
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| Protein GI | 167035385 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.644568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCAT CGCAGCCGCA GGCGTTCGCG CCTACCCGTT CCTTTGCCGC ACGCCCCTCT
GCCATCGCCA GCGCCCTCGC GCTTGCCGGT GTCGCCCCGA TGAGCCAGGC CGCCTTCTTC
GAAGACAGCA CGGCCACCTT CGAAACCCGC AACATGTACT TCAACCGCGA CTTCCGCGAC
GGCACCAGCG CGCAGCAGTC CAAGCGCGAC GAATGGGCCC AGGGCTTCAT CCTCAACTTC
GAGTCCGGCT ACACCGATGG CACCGTGGGC TTTGGCCTGG ACGCATTGGG CATGCTCGGC
ATCAAGCTCG ACTCCAGCCC CGACCGTACC GACACTGGCC TGCTGCCGAC CCACGATGAC
GGCAAGGCTG CCGATGAGTA TTCCAAGCTG GGCCTGACCG GCAAGGTGAA GATCTCCCAG
ACCGAGCTCA AGATCGGCAC CCTGATCCCC GAGCTGCCAA CGCTGCAGCC CAACGACGGG
CGTATCCTGC CGCAAACCTT CGAGGGCGGC CTGCTTACTT CCAAGGAGAT CAAGGGCCTG
ACCTTCACCG GTGGCCGCCT GGACAAGGCC AAGGACCGCA ACGACACCAA CTGGGAAGAC
TTGGCGCTGA ACAACAAGAA CGGCCGCTTC GGTGGCACCT TCAGCGCCGA CAACCTGGCC
CTGGGCGGGC TCGACTACCA GTTCACCGAC CGTATCACCG GCAGCTACCA CTTCGCCCAG
CTCGACGATA TCTACCGCCA GCACTTCATC GGCATGGTCG CCACCCAGCC ATGGGGCCCA
GGCACCTTGG GCGCCGACCT GCGCCTGGCG GTGAGCGACG ACGCCGGCGC CGCCAAGGCC
GGCAACATCG ACAACACCAC CTTCAACGGC ATGCTCAGCT ACGCCTTGGG CGGGCACAAG
GTCAGCGCCG CCTGGCAGCA ACTGTCTGGC GACAGCGCCT TCCCCTATGT CGATGGCGCC
GACCCGTACC TGGTCAACTT CGTCCAGATC AACGACTTCG CTGGTGCCGA CGAACGCTCC
TGGCAGGCGC GCTACGACTA CAACTTCGCC GCGCTCGGCG TGCCCGGCCT GACCTTCATG
ACCCGCTACA TCAGCGGTGA CAACGTCAGC CGTGCGGCCG GCGGTGAAGG CAAAGAGTGG
GAACGCAACA CGGAACTTAA GTACGTGGTA CAAAGCGGCC CGTTGAAGAA CGTCGCCGTG
CGCCTGCGCA ACGCCACCTT CCGCTCCAAC TTCGCCCGCG ACGCCGACGA AGTGAGGCTG
TTGGTCAGCT ACAGCGTGGC GCTGTGGTAA
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| Protein sequence | MLSSQPQAFA PTRSFAARPS AIASALALAG VAPMSQAAFF EDSTATFETR NMYFNRDFRD
GTSAQQSKRD EWAQGFILNF ESGYTDGTVG FGLDALGMLG IKLDSSPDRT DTGLLPTHDD
GKAADEYSKL GLTGKVKISQ TELKIGTLIP ELPTLQPNDG RILPQTFEGG LLTSKEIKGL
TFTGGRLDKA KDRNDTNWED LALNNKNGRF GGTFSADNLA LGGLDYQFTD RITGSYHFAQ
LDDIYRQHFI GMVATQPWGP GTLGADLRLA VSDDAGAAKA GNIDNTTFNG MLSYALGGHK
VSAAWQQLSG DSAFPYVDGA DPYLVNFVQI NDFAGADERS WQARYDYNFA ALGVPGLTFM
TRYISGDNVS RAAGGEGKEW ERNTELKYVV QSGPLKNVAV RLRNATFRSN FARDADEVRL
LVSYSVALW
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