Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4375 |
Symbol | |
ID | 5872182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4899312 |
End bp | 4900166 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641549509 |
Product | signal peptidase I |
Protein accession | YP_001670599 |
Protein GI | 167035368 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.272416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTAA ATTTCCCGCT GTTGCTAGTC ATCGCCGTCT TCGTCTGCGG TCTGCTGGGC TTGATCGACC TGCTGTTCCT GGCCCCGCGC CGGCGTGCGG CAATCGCCAA CTATCAGGGC AGCGTCAGCC AGCCCGAGAT GGCGGTGGTC GAACGCCTGA ACAAGGAGCC GTTGCTGGTC GAGTACGGCA AGTCGTTCTT CCCGGTGCTG TTCATCGTGC TGGTGCTGCG TTCGTTCCTG GTCGAGCCGT TCCAGATCCC GTCGGGTTCG ATGAAACCGA CGCTGGAAGT GGGCGACTTC ATCCTGGTGA ACAAGTTCTC GTACGGCATT CGTCTGCCGG TGATCGACAA GAAGGTCATC GAGGTCGGTG ATCCGCAACG CGGTGATGTG ATGGTGTTCC GTTACCCGAG CGACCCGAAC GTCAACTACA TCAAGCGTGT AGTAGGCCTG CCGGGCGACG TGGTCCGCTA CACCAACGAC AAGCGGTTGT TCGTCAACGG CCAGCCGATT GCCGAACAAC TGGTGGGCAG CGAACCGGGC ACCTTGGGCA GCGCGCAGCT GTACAAGGAA AAGCTCGGCG AGGCCGAACA CCTGATCCGC AAGGAGATGA GCCGTTATCG CATGCCGCCG GACCAGCAGT GGACCGTGCC GGCAGGCCAT TACTTCATGA TGGGCGACAA CCGCGACAAC TCCAACGACA GCCGTTTCTG GGATGACCCG AACATTCCCA AGGAACTGCA CGGCATGGTT CCGGACAGGA ACATTGTCGG CAAGGCCTTC GCGGTGTGGA TGAGCTGGCC AGAGCCCAAA CTCAGCCATC TGCCCAACCT GTCGCGGGTC GGTCTGATCC ATTGA
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Protein sequence | MSLNFPLLLV IAVFVCGLLG LIDLLFLAPR RRAAIANYQG SVSQPEMAVV ERLNKEPLLV EYGKSFFPVL FIVLVLRSFL VEPFQIPSGS MKPTLEVGDF ILVNKFSYGI RLPVIDKKVI EVGDPQRGDV MVFRYPSDPN VNYIKRVVGL PGDVVRYTND KRLFVNGQPI AEQLVGSEPG TLGSAQLYKE KLGEAEHLIR KEMSRYRMPP DQQWTVPAGH YFMMGDNRDN SNDSRFWDDP NIPKELHGMV PDRNIVGKAF AVWMSWPEPK LSHLPNLSRV GLIH
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