| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4346 |
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| Symbol | |
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| ID | 5872153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4862236 |
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| End bp | 4863564 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549480 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001670570 |
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| Protein GI | 167035339 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.788839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAG CGCCACTTAC CGTCCTGATC GTCGAAGACG ACCCGCATGT GCTGCTCGGC
TGCCAACAGG CACTGGCCCT CGAGGACATC GCCTGCGAAG GCGTGGGCAG CGCCGAACAG
GCACTGGAGC GCATCGGCGA CGATTTCGCC GGCATTGTCG TCAGCGATAT CCGCCTGCCG
GGCATCGATG GCCTGGAGTT GCTCAATCGC CTCAAGGCCC GTGACCGCAG CCTGCCGGTG
GTGCTGATTA CCGGCCATGG CGATATCGAC ATGGCCGTCG GCGCCATGCG CAACGGTGCC
TACGACTTCA TGGAAAAACC GTTCTCCCCC GAGCGGCTGG TCGACGTGGT GCGCCGCGCA
TTGGAGCAAC GTGGGCTGTC GCGCGAAGTA GTGGCCCTGC GCCGCCAACT GGCCGAACAG
AGCAGCCTGG AGGGGCGCAT CATTGGCCGC TCGCCGGCCA TGGAGCACTT GCGCGAATTG
ATCGCCAACG TTGCCGATAC TTCAGCCAAC GTACTGATCG AAGGTGAAAC CGGCACCGGC
AAAGAGCTGG TCGCGCGTTG CCTGCACGAC TTCAGCCGCC GCCAGGGTCA GCCGTTCGTG
GCGCTGAACT GTGGCGGCCT GCCGGAAAAC CTGTTCGAAA GCGAGATTTT CGGCCACGAG
GCCAACGCCT TCACCGGTGC CGGCAAACGC CGCATCGGCA AGATCGAACA TGCCAATGGC
GGTACGCTGT TCCTCGATGA AGTGGAAAGC ATGCCGATCA ACCTGCAGAT CAAGCTGCTG
CGCGTGCTGC AGGAGCGCAC CCTGGAGCGA CTGGGCTCGA ACCAGAGCAT CCCGGTGGAC
TGCCGGGTGA TCGCGGCGAC CAAAGCCGAC CTCGATACCC TGGGCCAGAG TGGCCAGTTC
CGCAGCGACC TGTACTACCG GCTGAACGTG GTAACCCTCG AACTGCCTCC GCTGCGTGAA
CGCCGTGAGG ACATCCTGCA ATTGTTCGAA CACTTCCTGC AGCAGTCGGC CCTGCGCTTC
GACCGGGAAA CACCGACACT GGACAGCCAG ACACTATCGC GTCTGATGGC CCATGACTGG
CCGGGCAACG TGCGCGAGTT GCGCAACGTG GCCGAACGCT ACGCCCTCGG CCTGCCAGCG
TTCAAGAAAG GCCCCAGTGG TGGTGCCAGC CAAGGCCTGG GCTTTGCCGA GGCGGTGGAA
GCATTCGAAC GCAACCTGCT CAGCGATGCG CTGCAACGCA CCGGCGGCAA CCTGAGCCAG
GCCAGCCAAG AGCTGGGCAT GGCCAAGACC ACGCTATTCG ACAAAGTGAA AAAATACGGC
CTCGGCTGA
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| Protein sequence | MNQAPLTVLI VEDDPHVLLG CQQALALEDI ACEGVGSAEQ ALERIGDDFA GIVVSDIRLP
GIDGLELLNR LKARDRSLPV VLITGHGDID MAVGAMRNGA YDFMEKPFSP ERLVDVVRRA
LEQRGLSREV VALRRQLAEQ SSLEGRIIGR SPAMEHLREL IANVADTSAN VLIEGETGTG
KELVARCLHD FSRRQGQPFV ALNCGGLPEN LFESEIFGHE ANAFTGAGKR RIGKIEHANG
GTLFLDEVES MPINLQIKLL RVLQERTLER LGSNQSIPVD CRVIAATKAD LDTLGQSGQF
RSDLYYRLNV VTLELPPLRE RREDILQLFE HFLQQSALRF DRETPTLDSQ TLSRLMAHDW
PGNVRELRNV AERYALGLPA FKKGPSGGAS QGLGFAEAVE AFERNLLSDA LQRTGGNLSQ
ASQELGMAKT TLFDKVKKYG LG
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