Gene PputGB1_4294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4294 
Symbol 
ID5872101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4807162 
End bp4807881 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content67% 
IMG OID641549428 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001670518 
Protein GI167035287 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGA CGTCGAAGGC GGCATTGCCG CTGTTGGTGG CTGCCAGCCT GCTTGCGGGC 
TGCGCCACGC ACAGCGATGG CAGCGCGCCA CTCAACCAAA GGACCTGGCC CATCTGCAGC
CTGCTGGGCG GCTTGGTCGG TGGTGGCCTG GGCGCCATCG AAAGTTCTAC CTGGGCCGCC
GGTGGCGGTG CCCTGGGCGC CATCGCCGGT GGGCTGATTT GCTATGCCCA GGACGGTGAC
GAAGACGGCG ACGGTATTTT CGATCGCCGC GACCATTGCC CTGATACCCC GGCCAATACG
GCGGTCGACC ACATGGGCTG CCCGTTGAAG GAATACCCTG CCGCGCCACC AGCCACTGTG
GCCGAACCGT CGCCCGAGGT GATCATCCTC GATGACAACG GCGCGGTGAT GTTCGCCTTC
GATTCCGCCG ACCTGACGCC GGCGGCCCAG CAGCGCCTGC AAGGCCTGGT GGCGAAACTC
GATTCACCAA CCGTGGCCAA GGTCCGTGTG ATCGGGCACA CCGACAATGT GGGCTCCGAC
AGTTACAACC AGGCGCTCTC CGAACGCCGC GCCAGCAGCG TGGCCGAATA CCTGATTGGC
CAGGGCCTGG AGGCGGGCAA GGTCACCAGC CAGGGCCGTG GCGAAAGCGA GCCGGTCACC
GACAACGAAA CCGAGGAGGG CCGCGCGCGC AACCGACGGG TGGAGCTGCA CCTCAACTGA
 
Protein sequence
MSVTSKAALP LLVAASLLAG CATHSDGSAP LNQRTWPICS LLGGLVGGGL GAIESSTWAA 
GGGALGAIAG GLICYAQDGD EDGDGIFDRR DHCPDTPANT AVDHMGCPLK EYPAAPPATV
AEPSPEVIIL DDNGAVMFAF DSADLTPAAQ QRLQGLVAKL DSPTVAKVRV IGHTDNVGSD
SYNQALSERR ASSVAEYLIG QGLEAGKVTS QGRGESEPVT DNETEEGRAR NRRVELHLN