Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4290 |
Symbol | dinG |
ID | 5872097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4803258 |
End bp | 4805402 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549424 |
Product | ATP-dependent DNA helicase DinG |
Protein accession | YP_001670514 |
Protein GI | 167035283 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGCA ACGAACTCAA AGCCACTATT CAGGGCGCCT ATTCGCGTTT TCTCGAAGCC AAGAGCCTCA AGCCGCGCTA CGGCCAGCGT CTGATGATCG CCGAAGTGGC CAAGGTGCTT GGCGACATTG CCTGCGACGA TGAAGGCCGG CGTGCCGGTG AGCCTGCCGT GGTGGCCGTG GAAGCGGGCA CCGGTACCGG CAAGACCGTG GCCTACAGCC TGGCCGCCAT TCCGGCCGCC AAGGCCGCCG GCAAGCGCCT GGTGATAGCC ACTGCCACCG TGGCCCTGCA GGAGCAGATC GTCTTCAAGG ACCTGCCCGA CCTGATGCGC AATAGCGGGC TCAACTTCAG CTTTGCCCTG GCCAAGGGCC GTGGCCGCTA CCTGTGCCTG TCCAAGCTCG ACATCCTGCT GCAGGAAGGC CATGCCCAGT CGGCCACCGC CCAGTTGTTC GAAGAAGAAG GCTTCCGTAT CGAAGTCGAC GAACGCAGCC AGAAGCTATT CAACAGCATG ATCGAGAAGC TCGCCGGCAA CCGCTGGGAC GGTGACCGTG ACAGTTGGCC CGAGGCCCTG GAAGACCAGG ACTGGGCACG CCTGACCACC GACCACAGCC AGTGCACGGG CCGTCATTGC CCGAACTTCC AGCAGTGCGT GTTCTACAAG GCCCGCGAAG GCATGGGCAA GGTCGACGTG ATCGTCACCA ACCACGACAT GGTCCTGGCC GACCTGGCCC TGGGCGGCGG TGCGGTATTG CCCGACCCGC GCGATACCAT GTACGTGTTC GACGAAGGCC ACCACCTGCC AGACAAGGCC ATCGGCCACT TCGCCCATTA TTCGCGGCTG CGTTCCACGG GCGACTGGCT TGAGCAGACG GCCAAGAACC TGACCAAGCT TCTGGCCCAG CACCCGCTGC CCGGTGACCT GGGCAAATAC ATCGAGCAGG TGCCGGAGCT GGCGCGGGAA GTGCGCACCC AACAACAGTT CATGTTCACG CTGTGCGAAC AGGTGGCCGA CTTCCGCCCC AGCGAGGACA CCGAAGGCCG TGAGCGCCCG CGCTACCGTT TTGAGGGTGG GGTGGTGCCA GAACAGATTC GCGAGGTGGG CATCGAGTTG AAGAAGGGCT TCGCCCGCCT CAACGACCTG TTCACCCGCC TGGCCGACCT GCTCAAGGAA GGGATGGACG GTGAGGTGAG CATCGGCATT GCCAGCCACC AGGCCGAAGA ATGGTATCCG CTGTTCGGCA GCCTGGTCAC CCGTGCCCAG GGCAACTGGG AACTGTGGAC GGCCTTTACC GCCGAAGACC CGGAAGACAG CCCGCCCATG GCCCGTTGGC TGACGTTGGC CGAAAGCGGT GCGATGTTCG ACATCGAAGT CAACGCCAGC CCCATTCTTG CTGCCGAAAT GCTCCGCCGC AGCCTGTGGA GCGTTGCCCA TGGCGCCTTG GTAACGTCGG CGACGTTGAC CGCGCTCGGC AAATTCGATC GCTTCCGCAT GCGCTCGGGC TTGCCGCGCG ATGCCGTCAC CTGTGTGGTC CCCAGCCCGT TCGTGCATGG CGATGCCGGC CTGTTGCGGG TCCCGGACTT GCAGGCCGAC CCACGCGATG CGGCGGCGCA CACGGCGGCG ATCATCCGCG AACTGCCGAA CATCGTCGAA GATGCCCGTG GCGCGCTGGT GCTGTTCTCG TCACGCAAGC AGATGCAGGA TGTGTTCGAC GGCCTGGACC GCGACTGGCG TAAGCTGGTG CTGATCCAGG GCAACCTGTC CAAGCAGGAA ACCCTGAACA AGCACAAGGC ACGGGTCGAC GATGGCCAGC ACAGCGTGTT GTTCGGCCTG GCCAGCTTTG CCGAAGGTGT CGACCTGCCG GGTGCGTACT GCGAGCACGT GGTCATCGCC AAAATTCCCT TCTCCGTGCC CGACGACCCG GTGGAGGCTG CCTTGTCGGA GTGGATCGAG GCCCGCGGCG GCAACCCGTT CATGGAAATT GCCGTGCCGG ACGCGTCGCT CAAGTTGATC CAGGCCTGTG GCCGCCTGCT GCGTACCGAG CAGGATCGCG GCGTCATCAC CTTGCTCGAT CGGCGTCTGG TCACCCAGCG TTACGGCAAG GCTATTCTCA ATGCGCTGCC GCCGTTCCGG CGGGAGATTT CCTGA
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Protein sequence | MISNELKATI QGAYSRFLEA KSLKPRYGQR LMIAEVAKVL GDIACDDEGR RAGEPAVVAV EAGTGTGKTV AYSLAAIPAA KAAGKRLVIA TATVALQEQI VFKDLPDLMR NSGLNFSFAL AKGRGRYLCL SKLDILLQEG HAQSATAQLF EEEGFRIEVD ERSQKLFNSM IEKLAGNRWD GDRDSWPEAL EDQDWARLTT DHSQCTGRHC PNFQQCVFYK AREGMGKVDV IVTNHDMVLA DLALGGGAVL PDPRDTMYVF DEGHHLPDKA IGHFAHYSRL RSTGDWLEQT AKNLTKLLAQ HPLPGDLGKY IEQVPELARE VRTQQQFMFT LCEQVADFRP SEDTEGRERP RYRFEGGVVP EQIREVGIEL KKGFARLNDL FTRLADLLKE GMDGEVSIGI ASHQAEEWYP LFGSLVTRAQ GNWELWTAFT AEDPEDSPPM ARWLTLAESG AMFDIEVNAS PILAAEMLRR SLWSVAHGAL VTSATLTALG KFDRFRMRSG LPRDAVTCVV PSPFVHGDAG LLRVPDLQAD PRDAAAHTAA IIRELPNIVE DARGALVLFS SRKQMQDVFD GLDRDWRKLV LIQGNLSKQE TLNKHKARVD DGQHSVLFGL ASFAEGVDLP GAYCEHVVIA KIPFSVPDDP VEAALSEWIE ARGGNPFMEI AVPDASLKLI QACGRLLRTE QDRGVITLLD RRLVTQRYGK AILNALPPFR REIS
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