Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4247 |
Symbol | |
ID | 5872051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4750286 |
End bp | 4751575 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641549378 |
Product | major facilitator transporter |
Protein accession | YP_001670471 |
Protein GI | 167035240 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGCA TCCGTTGGTG GATGGTCAGC CTTGTCACGG CCGGGCTCGT CGTCAACTAC CTCGCCCGCA ATACCCTCTC GGTGGCTGCC CCCACCTTGA TGACCGACCT TTCCATCAGT ACCGAGCAAT ACGCCAAGAT CGTCGCCGCC TGGCAGGTGT GCTACGCCCT CATGCAGCCG GTGGCCGGCT GGTTCATCGA CTTCATCGGC ACCAAGCTGG GCTTTGCCGT GTTCGCCATG GCCTGGTCTG TGGCCTGTGC CGGCGCGGCC CTGGCTACAG GCTGGCAGAG CATGGCATTC ATGCGCGGGC TGCTGGGCAT GACCGAGGCC GCGGGCTTGC CGGCCGGGGT CAAGGCTACT ACCGAGTGGT TCCCGGCCAA GGAGCGTTCG GTGGCGATCG GTTGGTTCAA TATCGGCTCG TCGCTTGGCG CCTTGCTGGC GCCGCCACTG GTGGTGTGGG CGATCCTGCA CAGTGGCTGG CAACTGGCGT TCGTCATTGT TGGCGCGTCA GGCATTGTCT GGACGTTGCT GTGGATGCTG CTGTACAAGC ACCCGCGTGA CCAGAAGCGC CTGAGTGATG AGGAACGGGA CTACATCCTT GCCGGGCAGG AAGCGCACTT CAAACAGGAC ACCCGCGAGA AGGGCGCGTG GAAGCGCATC TTCAAGACCC GCAACTTCTA CGCCATCGCA TCGGCGCGAA TTCTTTCCGA GCCCGCCTGG CAAACCTTCA ATGCCTGGAT CCCGCTGTAC CTGATGACCG AGCGGCACAT GAACATCAAG GAAGTGGCGA TGTTCGCCTG GCTGCCGTTC CTGGCGGCCG ATATCGGCTG TGTGCTGGGC GGTTACCTAA GCCCGTTGTT CCACCGCTAC TTCAAGGTGT CGCTGTTCAC CTCGCGCAAG ATGGTGCTGG TGTTCGGTGC CAGTTGCATG ATCGGCCCGG CCTGCATCGG CCTGGTGGAA AGCCCGTACA CCGCGATCCT GTTGCTGTGC ATTGGCGGCT TTGCCCACCA GACGCTGTCG GGGGCGCTGT ACTCGATCAC TTCGGATTCG TTCAGCAAGG ACCAGGTGGC CACGGCGACC GGCATGGGTG GCATGTGCGG CTATCTGGGG GCGGCGGTGT TCACCTTGGT GTTCGGCGTG CTGGTCACGC AGATTGGCTA CAGCCCGTTG TTCGTGGTGC TGGCAGCGTT CGATATCGTG GCGGCGGTGC TGGTGTGGAA GGTGGCGCGC GAAGTGAGTG GCGAGTCTTC TGTCAGGAAG ATGGCAAGCT CGACCGAGGC ACTGGCATAA
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Protein sequence | MKGIRWWMVS LVTAGLVVNY LARNTLSVAA PTLMTDLSIS TEQYAKIVAA WQVCYALMQP VAGWFIDFIG TKLGFAVFAM AWSVACAGAA LATGWQSMAF MRGLLGMTEA AGLPAGVKAT TEWFPAKERS VAIGWFNIGS SLGALLAPPL VVWAILHSGW QLAFVIVGAS GIVWTLLWML LYKHPRDQKR LSDEERDYIL AGQEAHFKQD TREKGAWKRI FKTRNFYAIA SARILSEPAW QTFNAWIPLY LMTERHMNIK EVAMFAWLPF LAADIGCVLG GYLSPLFHRY FKVSLFTSRK MVLVFGASCM IGPACIGLVE SPYTAILLLC IGGFAHQTLS GALYSITSDS FSKDQVATAT GMGGMCGYLG AAVFTLVFGV LVTQIGYSPL FVVLAAFDIV AAVLVWKVAR EVSGESSVRK MASSTEALA
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