| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4239 |
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| Symbol | |
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| ID | 5872043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4742245 |
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| End bp | 4743483 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549370 |
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| Product | outer membrane porin |
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| Protein accession | YP_001670463 |
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| Protein GI | 167035232 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTCT GCCATACCCT GCCTTTCGCC CTGTTGGGCG CCGGTGTCAT CGCTGGCCTG
CCGGGCACCA GCCTGGCTGC TGGATTTGTC GAAGACAGCA AGGCTACGCT CGGGCTGCGT
AACTTCTACA TCAACCGTAA CTTCACCAAC CCCAGCAACC CGCAAAGCAA GGCCGAGGAA
TGGACGCAAA GCTTCATCCT CGATGCGCGG TCGGGATTCA CCCAAGGGCC GATCGGGTTC
GGGGTGGATG TGCTGGGGCT ATGGTCGGTA AAGCTCGATG GCGGCGGCGG CACTTATGGT
ACAGCGTTGC TCCCGCGCCA CGACGATGGC AAGCCAGCAG ACGACTACGG GCGCCTGGCA
GTCGCAGGCA AGGCACGGAT CTCCAAGACC GAACTGAAAA TCGGCGAGTG GATGCCGGTG
CTACCGATTT TGCGTTCGGA CGACGGGCGC TCGCTGCCGC AGACGTTCCG TGGCGGGCAA
GTCACCTCCA ACGAGATCGC CGGGTTGACG TTGTATGGCG GCCAGTTCCG CGGCAACAGC
CCGCGTAACG ACGCCAGCAT GGAAGACATG AGCTACGGCG GCGGGGTGTC AGACCGCTTC
AACTTCGTCG GTGGCGAGTA TAAATTCAAC CAGGACCGCA CGCTGGTGGG GTTGTGGAAT
GCGGTACTGA AGGACGTGTA TCAGCAGCAG TATCTGCAAG TGAGCCATAA CCAGCCAGTG
GGTGACTGGA CCCTGGGCGC CAACCTGGGC TACTTCCAGG GCGATGAGGA TGGCTCCGAG
CGCGCCGGGC AGTTGGACAA CAAGACCTAC TCGGGGATGT TCTCGGCCAA GTACGGCGGC
AGCACGTTCT GGGTGGGGCT GCAGAAAGTT GATGGCGATA CCTGGATGCG GGTCAACGGC
ACCAGCGGCG GGACCCTGGC CAACGACAGT TACAACTCCA GCTTCGACAA TGCCAACGAA
CGCTCGTGGC AGGTGCGCCA TGACTTCAAC TTCGTGACGG TCGGGGTGCC GGGGTTGACC
TTGATGAACC GCTATATCAG CGGGCGCGAT GTGCATACCG GGTCGGTCAC TGATGGCAAG
GAGTGGGTGC GCGAGACGGA GCTTGCGTAT GTGATCCAGA GCGGGGCGTT CAAGGACTTG
AGTGTGAAGT GGCGCAACTC GTCGATTCGG CGGGATTACA GCAACAACGA GTTTGATGAG
AACCGGTTGA TCTTCAACTA CCCGTTGTCG TTGCTGTAA
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| Protein sequence | MRVCHTLPFA LLGAGVIAGL PGTSLAAGFV EDSKATLGLR NFYINRNFTN PSNPQSKAEE
WTQSFILDAR SGFTQGPIGF GVDVLGLWSV KLDGGGGTYG TALLPRHDDG KPADDYGRLA
VAGKARISKT ELKIGEWMPV LPILRSDDGR SLPQTFRGGQ VTSNEIAGLT LYGGQFRGNS
PRNDASMEDM SYGGGVSDRF NFVGGEYKFN QDRTLVGLWN AVLKDVYQQQ YLQVSHNQPV
GDWTLGANLG YFQGDEDGSE RAGQLDNKTY SGMFSAKYGG STFWVGLQKV DGDTWMRVNG
TSGGTLANDS YNSSFDNANE RSWQVRHDFN FVTVGVPGLT LMNRYISGRD VHTGSVTDGK
EWVRETELAY VIQSGAFKDL SVKWRNSSIR RDYSNNEFDE NRLIFNYPLS LL
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