Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4230 |
Symbol | |
ID | 5872034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4730599 |
End bp | 4731324 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641549361 |
Product | two component transcriptional regulator |
Protein accession | YP_001670454 |
Protein GI | 167035223 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTGCTGCG AAGAGGCCGG TATAGGCAAT ACACACAAGG AGCTGCACAT GAAACTGCTG GTGGTCGAGG ACGAAGCCCT GCTTCGCCAT CACCTCTACA CCCGCCTGGG CGAAAGTGGC CATGTGGTCG AAGCCGTTGC CGACGCCGAG GAGGCGCTGT ACCAGGCTGG GCAATACCAC TTCGACCTGG CCATCGTCGA CCTGGGCCTG CCTGGTATCA GTGGACTGGA GCTGATCACG CGCCTGCGCA GCCAGGACAA GACCTTCCCC ATTCTTATCC TTACCGCTCG AGGCAACTGG CAGGACAAGG TCGAAGGCCT GGCCGCCGGT GCCGACGACT ACCTGGTCAA GCCGTTTCAG TTCGAAGAGC TCGAAGCGCG GCTCAATGCC CTGTTGCGCC GCTCCAGTGG CTTCACCCAG TCGACCATTG CCGCAGGCCC CTTGGTGCTC GACCTCAACC GCAAGCAGGC CACCCTCGAC GAACTGCCTT TGGCACTGAC CGCCTACGAA TACCGCATTC TCGAATACCT CATGCGCCAT CATCAGCAGG TAGTGGCCAA GGACCGACTG ATGGAGCAGC TGTACCCTGG GGATGAGGAG CGCGACCCCA ATGTCATCGA AGTGCTGGTT GGCCGCCTGC GCCGCAAGCT TGAAGGCGCG CACGGCTTCA AACCCATCGA CACGGTGCGT GGCCTGGGCT ATCTGTTCAC CGAGCGCTGC CGATGA
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Protein sequence | MCCEEAGIGN THKELHMKLL VVEDEALLRH HLYTRLGESG HVVEAVADAE EALYQAGQYH FDLAIVDLGL PGISGLELIT RLRSQDKTFP ILILTARGNW QDKVEGLAAG ADDYLVKPFQ FEELEARLNA LLRRSSGFTQ STIAAGPLVL DLNRKQATLD ELPLALTAYE YRILEYLMRH HQQVVAKDRL MEQLYPGDEE RDPNVIEVLV GRLRRKLEGA HGFKPIDTVR GLGYLFTERC R
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