Gene PputGB1_4230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4230 
Symbol 
ID5872034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4730599 
End bp4731324 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID641549361 
Producttwo component transcriptional regulator 
Protein accessionYP_001670454 
Protein GI167035223 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGCTGCG AAGAGGCCGG TATAGGCAAT ACACACAAGG AGCTGCACAT GAAACTGCTG 
GTGGTCGAGG ACGAAGCCCT GCTTCGCCAT CACCTCTACA CCCGCCTGGG CGAAAGTGGC
CATGTGGTCG AAGCCGTTGC CGACGCCGAG GAGGCGCTGT ACCAGGCTGG GCAATACCAC
TTCGACCTGG CCATCGTCGA CCTGGGCCTG CCTGGTATCA GTGGACTGGA GCTGATCACG
CGCCTGCGCA GCCAGGACAA GACCTTCCCC ATTCTTATCC TTACCGCTCG AGGCAACTGG
CAGGACAAGG TCGAAGGCCT GGCCGCCGGT GCCGACGACT ACCTGGTCAA GCCGTTTCAG
TTCGAAGAGC TCGAAGCGCG GCTCAATGCC CTGTTGCGCC GCTCCAGTGG CTTCACCCAG
TCGACCATTG CCGCAGGCCC CTTGGTGCTC GACCTCAACC GCAAGCAGGC CACCCTCGAC
GAACTGCCTT TGGCACTGAC CGCCTACGAA TACCGCATTC TCGAATACCT CATGCGCCAT
CATCAGCAGG TAGTGGCCAA GGACCGACTG ATGGAGCAGC TGTACCCTGG GGATGAGGAG
CGCGACCCCA ATGTCATCGA AGTGCTGGTT GGCCGCCTGC GCCGCAAGCT TGAAGGCGCG
CACGGCTTCA AACCCATCGA CACGGTGCGT GGCCTGGGCT ATCTGTTCAC CGAGCGCTGC
CGATGA
 
Protein sequence
MCCEEAGIGN THKELHMKLL VVEDEALLRH HLYTRLGESG HVVEAVADAE EALYQAGQYH 
FDLAIVDLGL PGISGLELIT RLRSQDKTFP ILILTARGNW QDKVEGLAAG ADDYLVKPFQ
FEELEARLNA LLRRSSGFTQ STIAAGPLVL DLNRKQATLD ELPLALTAYE YRILEYLMRH
HQQVVAKDRL MEQLYPGDEE RDPNVIEVLV GRLRRKLEGA HGFKPIDTVR GLGYLFTERC
R