| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4211 |
|---|
| Symbol | |
|---|
| ID | 5872012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4705958 |
|---|
| End bp | 4706377 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641549339 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_001670435 |
|---|
| Protein GI | 167035204 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGTCC TCGATTCACG TTTGCAGCTG GATTCCCTGG TGCTGGGGGA GTTTGCGCTG
TGCCAGTTGC TGCTAAGCAA GGATGCCAAT TACCCATGGT TCATCCTGGT GCCCAAGCGC
GCCGGCATCA GCGAACTGTT CGAGCTGGAT GCGGCAGAAC AGCAACAGTT GTGGCAGGAA
ACCACCGTGT TGGCCGAAGC ACTGAAGACC AGCTACGGCG CTGACAAGAT GAACGTGGCA
ACGTTGGGCA ATGTGGTCAG CCAGCTGCAT ATGCATGTGA TCGTGCGCCG GCGCGACGAT
GCTGCCTGGC CGGCCCCGGT TTGGGGCAAG TGCCCGTCGG TGGCGTACAC CGATGATCAG
CTGCAAGCCG TTCGCCAGCG CCTGCGCGGG CTGCAATTGG CTGGTTACCA GGAGGCCTGA
|
|---|
| Protein sequence | MFVLDSRLQL DSLVLGEFAL CQLLLSKDAN YPWFILVPKR AGISELFELD AAEQQQLWQE
TTVLAEALKT SYGADKMNVA TLGNVVSQLH MHVIVRRRDD AAWPAPVWGK CPSVAYTDDQ
LQAVRQRLRG LQLAGYQEA
|
|---|
| |