| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4190 |
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| Symbol | |
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| ID | 5871990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4688055 |
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| End bp | 4690121 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641549317 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001670414 |
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| Protein GI | 167035183 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.251316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTGC GTCGCCTCTC CATCCAATGG AAGATCACCT TGCTTGCCGG CCTGTGTCTG
CTGGCCATCG TCGCCTTGCT GGTGGCCACC TCGCTGACCC AGGCGCAACG CAGCGCGGCC
TTGGTCAACC AGGCCAACAC CGCCATGCTC GACAGCAGCG CCCGCCTGCG CCTGCAGGCC
CATGCGCAAA CCCAGGCCCT GCGAATACAG CGCTACTTCA TGGACGCCTA CCAATACGGC
AATGGCTTTG CCCGCCTGGT ACAGGTACTG AAGGCCCGTG GCGGCAGCGA CCTGCGCGCC
GAACTGACCC GCCAGGCGCG TGCCAGCCTG GCCGGCAACC CGGATGTGAT CGGCCTGTAC
TTGGTATTCC AGCCCGATGC CCTGGACCAG CAAGACAGCC AGTACCTTGG CCAGGACGCC
ATGGGCAGCA ATGAGCGCGG ACGCTTTTCG CTTTACTGGT CGCAACCAAC CCCCGGCACC
CTGGAACTGG AAGCCATGCC GGAAACGATG CTTGGCGATA CCAGTATCGG CAGCAACGGC
GCAGCGAAAA ACCGCTGGCT GACCTGCCCG CAGGACACCG GCAGAACCTG CATGCTCGAA
CCGTACCTCG ACGAGGTCAA CGGCCGCCAA GTACTGATGA CCAGCATCGC CTTGCCGCTG
CTGGAGCACG GCAAGGTGGT CGGCGTGGTC GGCCTGGACA TCGGCCTGGC CAACCTGCAG
CAACTGAGCG TGGACGGCCG CCGCGAGCTG TTCGATGGCC AGGGCCAAGT GAGTATCGCC
AGCGCCGCCG GCCTGCTGGC CGGTAACAGC CGCGACGACA CGACGCTCGG CAAACCCATG
GACAACGCAG TAGCCGATGG CCTGCTGCGC GTGGCCCACC CTTTCACACC AATCCCTGAC
GCAGCCCCAT GGCAAGTGTT GCTGGAGCTG CCGGAAAGCG TGCTGCAGGC CCCTGCCGCC
GCACTCAACC AGCGCCTGGA CGCGCACAAC CAACGCGCCA ACCTCACCAG CCTGCTGATC
GGCCTGGGCG CAGCCGTGGT CGGCTTGCTG CTGGTGTGGC TGACCGCACG CGGCGTTACT
CGGCCAATCC TGGCCGTGGC CGCACGCCTG GAAGACATCG CCAGCGGCGA AGGCGACCTG
ACCCGTCGCC TGGACTACGC CCGCCAGGAC GAGCTGGGCC AGCTCACCGG CTGGTTCAAC
CGCTTCCTCG ACAAGCTGCA GCCAGTCATC GCCCAAGTCA AAGGCTCACT GCAGGAGGCC
CGCGGCACCG CCGACCAGTC GGCCGCCATC GCCAGCCAGA CCAGCAACGG CATGCAGCAA
CAGCATCGCG AAATCGAACA GGTGGCCACG GCGGCCAACG AAATGAGCGC CACTGCCCTG
GATGTCGCCC ATAACGCCTC GCAGGCGGCC CAGGCCGCAC GCGCCGCCGA CCAGGCCAGC
CAGGAAGGCC TGCAACTGAT CGACAGCACG CGTCAAGGCA TCGATCGACT GGCCGCCGGC
ATGAACACAG CCATGGACGA AGCGCGTGCG CTGGAAGGCC GCAGCGGGCA GATCGGCTCG
GTGCTGGAGG TGATCCGTAC CATTGCCGAG CAGACCAACC TGCTGGCACT GAATGCCGCC
ATCGAAGCGG CTCGTGCCGG CGAAGCCGGG CGTGGCTTCG CCGTGGTCGC CGACGAGGTG
CGCGGCCTGG CTCAACGCAC GCAGGTGTCG GTGGAGGAAA TTCGCCAGGT CATCGAAGGC
CTGCAGCAAG GCACGCAGGA TGTCGTCGGT GCCATGCATG AAGGCCAGCG CCAGGCCCAG
GACAGCGCCG CGCGCATGGA GCAGGCGCTG CCGGCACTGC AGCGAATTGG CGAGGCGGTG
GCGGTCATCA GCGACATGAA CTTGCAAATT GCCTCGGCGG CTGAGGAGCA GAGCGCGGTG
GCCGAGGAAG TGAACCGCAA CGTGGCCGGC ATCCGTGATG TGACAGAATC ACTGGCTGGC
CAGGCTGACG AATCGGCGCG CATCAGCCAG GCGCTGAACC GGCTTGCCAA TCAGCAGCAG
GCGCTGATGG AGCAATTTCG CGTCTAG
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| Protein sequence | MPLRRLSIQW KITLLAGLCL LAIVALLVAT SLTQAQRSAA LVNQANTAML DSSARLRLQA
HAQTQALRIQ RYFMDAYQYG NGFARLVQVL KARGGSDLRA ELTRQARASL AGNPDVIGLY
LVFQPDALDQ QDSQYLGQDA MGSNERGRFS LYWSQPTPGT LELEAMPETM LGDTSIGSNG
AAKNRWLTCP QDTGRTCMLE PYLDEVNGRQ VLMTSIALPL LEHGKVVGVV GLDIGLANLQ
QLSVDGRREL FDGQGQVSIA SAAGLLAGNS RDDTTLGKPM DNAVADGLLR VAHPFTPIPD
AAPWQVLLEL PESVLQAPAA ALNQRLDAHN QRANLTSLLI GLGAAVVGLL LVWLTARGVT
RPILAVAARL EDIASGEGDL TRRLDYARQD ELGQLTGWFN RFLDKLQPVI AQVKGSLQEA
RGTADQSAAI ASQTSNGMQQ QHREIEQVAT AANEMSATAL DVAHNASQAA QAARAADQAS
QEGLQLIDST RQGIDRLAAG MNTAMDEARA LEGRSGQIGS VLEVIRTIAE QTNLLALNAA
IEAARAGEAG RGFAVVADEV RGLAQRTQVS VEEIRQVIEG LQQGTQDVVG AMHEGQRQAQ
DSAARMEQAL PALQRIGEAV AVISDMNLQI ASAAEEQSAV AEEVNRNVAG IRDVTESLAG
QADESARISQ ALNRLANQQQ ALMEQFRV
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