| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4087 |
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| Symbol | |
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| ID | 5871887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4568510 |
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| End bp | 4569493 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549215 |
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| Product | taurine catabolism dioxygenase TauD/TfdA |
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| Protein accession | YP_001670313 |
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| Protein GI | 167035082 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.744536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAC TGCTGAGCTT TGCCATCGAA CCGCTGGACG CCGCGCGCGG CAACCTGCCG
CTGCTGGTGC GCGCACCGGA GCCGGGGATC GACCTGCTGG AGGCTTTTAC CGAATTGCAG
CCGCTGGTGG ATCGGCACCT GCTGCAGGCT GGCGGCATCC TGTTCCGCGG CTTCGAGGTG
GGTGGCGCCG AAGCCTTCCG CCAGTTTGCC GCCTCCTTTG GTCACCCACT GCTCAACTAC
GAGTTCGGCT CTACCCCGCG CAGCAACGTG ACCAAGGGCG TGTACACCTC AACCGAATAC
CCGGCGCACC AGAGCATTCC CCTGCACAAC GAGCAGGCCT ACACCCTGGA ATGGCCGATG
AAGATCTGGT TCTACAGCGT GATCCCCGCC GAGACCGGCG GCGAAACGCC AATTGCCGAT
AGCCGCGAGG TGTACCGACG CATGCCGACG CGCATTCGCC AGCGCTTGGA GGAGAAAGGG
CTGATGTATG TGCGCAACTA TGGCAACGGC CTGGATGTGG AGTGGTCGCA GGTGTTCAAC
ACCGAAGACC CGCGCCAGGT CGAGGCGTAC TGCCGGGCGC ATGCCATCGA GTGCATATGG
AAGGACGACG GCGAGCTGCG CACGCGCCAG CGCTGCCAGG TGGTGGCGCG CCATCCGGTA
ACCGGGGATG ACGTGTGGTT CAATCAGGCC CACCTGTTCC ATGTGTCGAA CCTGCAGCCA
GAGGTGCGTG AATCGCTGAT GGACATTGTC GAGGAAGAGG ACCTGCCACG TAACGTGTAT
TACGGCGACG GTACGACCAT CGAGGATTCG TTGCTCGATG AAGTGCGCGG GGTGCTGGAT
GAATGCACCA TCAGCTTCCC CTGGCTGACA AACGATGTGC TGATGCTCGA CAACATGCTC
GCGGCCCACG CCCGCTCGCC GTTTACCGGT AAGCGCAAGG TGGTGGTGGC GATGGCCGAG
GGGCACAGCG AGGTGTTGGG CTGA
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| Protein sequence | MSELLSFAIE PLDAARGNLP LLVRAPEPGI DLLEAFTELQ PLVDRHLLQA GGILFRGFEV
GGAEAFRQFA ASFGHPLLNY EFGSTPRSNV TKGVYTSTEY PAHQSIPLHN EQAYTLEWPM
KIWFYSVIPA ETGGETPIAD SREVYRRMPT RIRQRLEEKG LMYVRNYGNG LDVEWSQVFN
TEDPRQVEAY CRAHAIECIW KDDGELRTRQ RCQVVARHPV TGDDVWFNQA HLFHVSNLQP
EVRESLMDIV EEEDLPRNVY YGDGTTIEDS LLDEVRGVLD ECTISFPWLT NDVLMLDNML
AAHARSPFTG KRKVVVAMAE GHSEVLG
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