| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4056 |
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| Symbol | |
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| ID | 5871856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4510918 |
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| End bp | 4512615 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549184 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001670282 |
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| Protein GI | 167035051 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.602751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAA ATTTTTGGAA GGATAAGTAC CCAGCCGGGA TTACGGCGGA AATCAATCCT
GACGAATTCC CCAATATCCA GGCAGTACTC AAGCAATCCT GCCAACGCTT TGCCGACAAA
CCGGCCTTTA GCAACCTGGG CAAGACTATC ACTTATGGCG AGTTGTATGC GCTGTCGGGG
GCGTTTGCCG CCTGGCTGCA GCAGCATACC GACCTCAAGC CGGGTGACCG CATTGCCGTG
CAACTGCCCA ATGTCCTGCA ATACCCGGTC GCGGTCTTCG GCGCCATGCG TGCCGGGCTG
ATCGTGGTCA ACACCAACCC GCTGTATACC GCGCGGGAGA TGGAACACCA GTTCAACGAC
TCCGGCGCCA AGGCCCTGGT GTGCCTGGCC AACATGGCCC ACCTGGCCGA AAAGGTGGTA
CCCAAGACCC AGGTCAAACA CGTCATCGTC ACTGAAGTGG CCGACCTGCT GCCGCCGCTT
AAGCGCCTGT TGATCAACAG CGTGATCAAG TACGTGAAGA AGATGGTGCC GGCCTACAGC
CTGCCACAAG CCGTGCGCTT CAACGACGCC CTGGCGTTGG GCAAGGGCCA GCCGGTTACC
GAGGCCAACC CGCAGGCCAA CGATGTGGCC GTGCTGCAAT ACACCGGCGG TACGACCGGC
GTGGCCAAAG GCGCCATGCT GACCCATCGC AACCTGGTGG CCAACATGCT GCAGTGCCGG
GCGCTGATGG GCTCGAACCT GCACGAAGGC TGCGAGATCC TCATCACCCC GCTGCCGCTG
TACCACATCT ATGCCTTTAC CTTCCATTGC ATGGCGATGA TGCTGATCGG CAACCACAAC
GTGCTGATCA GCAACCCGCG TGACCTGCCG GCCATGGTCA AGGAACTGGG CAAGTGGAAG
TTCAGCGGTT TTGTCGGCCT CAACACACTG TTCGTTGCCC TGTGCAACAA CGAGGCGTTC
CGTGCCCTGG ACTTCTCGGC GCTGAAAATC ACCCTGTCGG GTGGTATGGC CCTGCAACTG
AGCGTGGCCG AGCGCTGGAA GGCCGTTACT GGTTGCGCCA TCTGCGAAGG TTACGGCATG
ACCGAAACCA GCCCGGTGGC GGCAGTGAAC CCGGCGGAGG CCAACCAGGT GGGCACCATC
GGTATTCCGG TGCCATCGAC CCTGTGCAAG ATCATCGACG ACGCCGGCAA CGAGCTACCG
CTGGGCGAAG TGGGCGAGCT GTGTGTGAAG GGCCCGCAGG TGATGAAGGG CTACTGGCAG
CGCGAAGACG CCACTGCCGA GATTCTCGAC AGCGAAGGCT GGCTGAAGAC CGGTGACATC
GCCCTGATCC AGGCGGACGG TTACATGCGC ATCGTCGACC GCAAGAAGGA CATGATCCTG
GTTTCTGGCT TCAACGTGTA CCCCAACGAG CTGGAAGACG TGCTGGCGGC CCTGCCGGGC
GTGCTGCAGT GTGCAGCCAT TGGTGTGCCG GACGAGAAGT CGGGTGAAGT GATCAAGGTA
TTCATCGTGG TCAAGCCGGG CATGACCGTG ACCAAGGAGC AGGTGATGGA GCACATGCGT
GCCAACGTTA CCGGCTACAA GGTGCCGCGC CAGATCGAGT TCCGCGACGC ACTGCCGACC
ACCAACGTGG GCAAGATCCT GCGCCGCGAA TTGCGCGATG AAGAACTGAA GAAGCAAGGC
TTGAAGAAGA TCGCCTGA
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| Protein sequence | MIENFWKDKY PAGITAEINP DEFPNIQAVL KQSCQRFADK PAFSNLGKTI TYGELYALSG
AFAAWLQQHT DLKPGDRIAV QLPNVLQYPV AVFGAMRAGL IVVNTNPLYT AREMEHQFND
SGAKALVCLA NMAHLAEKVV PKTQVKHVIV TEVADLLPPL KRLLINSVIK YVKKMVPAYS
LPQAVRFNDA LALGKGQPVT EANPQANDVA VLQYTGGTTG VAKGAMLTHR NLVANMLQCR
ALMGSNLHEG CEILITPLPL YHIYAFTFHC MAMMLIGNHN VLISNPRDLP AMVKELGKWK
FSGFVGLNTL FVALCNNEAF RALDFSALKI TLSGGMALQL SVAERWKAVT GCAICEGYGM
TETSPVAAVN PAEANQVGTI GIPVPSTLCK IIDDAGNELP LGEVGELCVK GPQVMKGYWQ
REDATAEILD SEGWLKTGDI ALIQADGYMR IVDRKKDMIL VSGFNVYPNE LEDVLAALPG
VLQCAAIGVP DEKSGEVIKV FIVVKPGMTV TKEQVMEHMR ANVTGYKVPR QIEFRDALPT
TNVGKILRRE LRDEELKKQG LKKIA
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