Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4019 |
Symbol | |
ID | 5871819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4469607 |
End bp | 4469888 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549147 |
Product | hypothetical protein |
Protein accession | YP_001670245 |
Protein GI | 167035014 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3526] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02174] selT/selW/selH selenoprotein domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00456234 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCCGACA GCAAGCCGGA AATCGTTATC ACCTATTGCA CCCAGTGCCA GTGGCTGCTG CGTGCTGCCT GGCTGGCCCA GGAACTGCTC AGCACCTTTG CCGACGACCT GGGCCGGGTA GCGCTGGAGC CGGGCACCGG CGGCATCTTC CGCATCACCT GCAATGGCGT GCAGATCTGG GAGCGCAAGG CCGACGGTGG TTTCCCCGAG GCCAAGGTAT TGAAGCAGCG GGTGCGCGAC CAGATCGACC CACAGCGTGA CCTTGGCCAC AACGACCGCT GA
|
Protein sequence | MADSKPEIVI TYCTQCQWLL RAAWLAQELL STFADDLGRV ALEPGTGGIF RITCNGVQIW ERKADGGFPE AKVLKQRVRD QIDPQRDLGH NDR
|
| |