Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4006 |
Symbol | |
ID | 5871806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4458612 |
End bp | 4459472 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549134 |
Product | phosphotransferase domain-containing protein |
Protein accession | YP_001670232 |
Protein GI | 167035001 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00000044787 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATGTTG ATCTGCACTG TCACAGCACG GCCTCCGACG GCGCCCTGTC GCCTACGGTA CTGGTTGCCC GGGCCCATGA GCACGGGGTG CAAACGCTGG CACTGACTGA CCATGACACC ATCGAAGGCC TGCCTGAAGC GCGCCAGGCC TGCGTTGACC TGGGTATGCG CTGGGTCAGC GGGGTAGAGT TGTCCTGCAC CTGGGGTGGT GCGACCATCC ATGTGCTGGG CTATGACTTC CCGCTCGACG CACCGCCGTT GCTGGCTGCG ATCGAGGCAT TGCACCGCGG CCGCTGGTTG CGCGCCGAAG AAATAGACAA ACGGCTGGCG GGCAAAGGCA TGCCCGGCAC CCTTGAAGGT GCGCGCGCCG TTCAGCAAGA ACTGGGTGAC AGCGGCAACG CACCGGCGCG CCCGCATTTT GCCGAGCACC TGGTGCGTGC CGGGCACGTC AAGGACCGGG GCGAAGCGTT TCGCAAGTGG CTGGGCGCCG GTAAGCTGGG CGACGTCAAG CAGCACTGGC CGTCCCTTGA CGAAACCGTT GCCACGCTAA GGCAGTCCAA CGCTTGGGTA AGCCTGGCGC ATCCCATGCA TTACGATCTG ACCCGCAGCA AGCGCAGACG GCTGATTGCC GACTATATTC AGGCAGGAGG GCAGGCGCTT GAGGTGGTCA ATGGGATGAT GCCTGCCGAG CAAGTGGGCA CCATGTCCAT CCTTACCCGT GAGTTCGGCC TGCTGGCAAG CGCTGGCAGT GACTTCCACG GCCCCGGCAC CTGGGGCGAG ATTGGTGCCT ATCGGCCTTT GCCCGAGGAC CTGCCACCTT TGTGGCGTCG ATTCAGCCAT GAACAGCCTT TGGCGCTATG A
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Protein sequence | MNVDLHCHST ASDGALSPTV LVARAHEHGV QTLALTDHDT IEGLPEARQA CVDLGMRWVS GVELSCTWGG ATIHVLGYDF PLDAPPLLAA IEALHRGRWL RAEEIDKRLA GKGMPGTLEG ARAVQQELGD SGNAPARPHF AEHLVRAGHV KDRGEAFRKW LGAGKLGDVK QHWPSLDETV ATLRQSNAWV SLAHPMHYDL TRSKRRRLIA DYIQAGGQAL EVVNGMMPAE QVGTMSILTR EFGLLASAGS DFHGPGTWGE IGAYRPLPED LPPLWRRFSH EQPLAL
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