Gene PputGB1_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4006 
Symbol 
ID5871806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4458612 
End bp4459472 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content64% 
IMG OID641549134 
Productphosphotransferase domain-containing protein 
Protein accessionYP_001670232 
Protein GI167035001 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00000044787 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATGTTG ATCTGCACTG TCACAGCACG GCCTCCGACG GCGCCCTGTC GCCTACGGTA 
CTGGTTGCCC GGGCCCATGA GCACGGGGTG CAAACGCTGG CACTGACTGA CCATGACACC
ATCGAAGGCC TGCCTGAAGC GCGCCAGGCC TGCGTTGACC TGGGTATGCG CTGGGTCAGC
GGGGTAGAGT TGTCCTGCAC CTGGGGTGGT GCGACCATCC ATGTGCTGGG CTATGACTTC
CCGCTCGACG CACCGCCGTT GCTGGCTGCG ATCGAGGCAT TGCACCGCGG CCGCTGGTTG
CGCGCCGAAG AAATAGACAA ACGGCTGGCG GGCAAAGGCA TGCCCGGCAC CCTTGAAGGT
GCGCGCGCCG TTCAGCAAGA ACTGGGTGAC AGCGGCAACG CACCGGCGCG CCCGCATTTT
GCCGAGCACC TGGTGCGTGC CGGGCACGTC AAGGACCGGG GCGAAGCGTT TCGCAAGTGG
CTGGGCGCCG GTAAGCTGGG CGACGTCAAG CAGCACTGGC CGTCCCTTGA CGAAACCGTT
GCCACGCTAA GGCAGTCCAA CGCTTGGGTA AGCCTGGCGC ATCCCATGCA TTACGATCTG
ACCCGCAGCA AGCGCAGACG GCTGATTGCC GACTATATTC AGGCAGGAGG GCAGGCGCTT
GAGGTGGTCA ATGGGATGAT GCCTGCCGAG CAAGTGGGCA CCATGTCCAT CCTTACCCGT
GAGTTCGGCC TGCTGGCAAG CGCTGGCAGT GACTTCCACG GCCCCGGCAC CTGGGGCGAG
ATTGGTGCCT ATCGGCCTTT GCCCGAGGAC CTGCCACCTT TGTGGCGTCG ATTCAGCCAT
GAACAGCCTT TGGCGCTATG A
 
Protein sequence
MNVDLHCHST ASDGALSPTV LVARAHEHGV QTLALTDHDT IEGLPEARQA CVDLGMRWVS 
GVELSCTWGG ATIHVLGYDF PLDAPPLLAA IEALHRGRWL RAEEIDKRLA GKGMPGTLEG
ARAVQQELGD SGNAPARPHF AEHLVRAGHV KDRGEAFRKW LGAGKLGDVK QHWPSLDETV
ATLRQSNAWV SLAHPMHYDL TRSKRRRLIA DYIQAGGQAL EVVNGMMPAE QVGTMSILTR
EFGLLASAGS DFHGPGTWGE IGAYRPLPED LPPLWRRFSH EQPLAL