| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4005 |
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| Symbol | |
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| ID | 5871805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4457969 |
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| End bp | 4458634 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549133 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_001670231 |
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| Protein GI | 167035000 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000384019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACAGCC TTTGGCGCTA TGAACAGGAC GACTACGTGA GCCAATTTTT CCAGATTCAT
CCGGAGAACC CACAGGCGCG CTTGATAAAA CAGGCCGTCG AGATCATCCG CAAGGGGGGG
GTGGTGGTGT ATCCGACGGA TTCGGCCTAT GCCCTGGGTT GCCAGATGGG CGACAAGAAC
GCCATCGAGC GGGTGCGGCG CCTGCGCGGG CTGGACAAGA CGCACAACTT CACCCTGATG
TGCTGCGACA TGTCGCAACT GGGCTTGTAC GCCAAGGTCG ATACCGGCAC TTTTCGCCTG
CTCAAGGCGC ATGTACCGGG GCCTTACACG TTCATTCTCA ACGGCACGCG TGAAGTGCCG
CGCCTGCTGT TGCACGACAA GCGCCGCACC ATCGGGCTGC GTGTACCGAA CCACGTCATT
ACCCTGGCCT TGCTGGCCGA GTTGGGCGAG CCACTGATGA GCGTGAGCCT GATCCTGCCG
GGCGACAGCG AGCCGATGAC CGACCCTTAC GAGATCCGTG AGCGGCTGGA GCACCATGTC
GACCTGGTGA TCGACGGCGG CTTCGGCGAC CTCAAGGCGT CGACCATCAT CGACCTGTCC
GGTGACGAGC CGGAACTGAT CCGCGAAGGT TGCGGCGACC CCACGCCGTT CCTGGTCAAC
GCGTGA
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| Protein sequence | MNSLWRYEQD DYVSQFFQIH PENPQARLIK QAVEIIRKGG VVVYPTDSAY ALGCQMGDKN
AIERVRRLRG LDKTHNFTLM CCDMSQLGLY AKVDTGTFRL LKAHVPGPYT FILNGTREVP
RLLLHDKRRT IGLRVPNHVI TLALLAELGE PLMSVSLILP GDSEPMTDPY EIRERLEHHV
DLVIDGGFGD LKASTIIDLS GDEPELIREG CGDPTPFLVN A
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