| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3885 |
|---|
| Symbol | |
|---|
| ID | 5871679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 4331780 |
|---|
| End bp | 4332679 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641549007 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001670111 |
|---|
| Protein GI | 167034880 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.951156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGC GATCAACCTT AATACTGGCT CTTTTAATGA GCGGCTGCGC CACCACGCCA
CCGGTGGTAA CCCATAATGC GCCGCTGGCC GCTCGCGCCT ACCAGGAAGG TAACTTGGTT
GCCGCACGTT TAAGCGAACG CTACCACTAT GCACCACCTG ATTGCGGCGA GGACTCAAAA
CCTGCATTTC TGTGCAGCGG TGTAATTTTC AGGGCTACCC ATTACTCCCC CGCGTATGAC
GCGTGGAATC CCAGCCCACC CTCAGTCGTA AGTGGTGGCG TATCGTTCTC CTATCTGCGC
AAGGACGCCA AATTCAACAC CATGCTGCCG GGTCAGCACA ATGGCTACAT ATTGCACCCC
GTCCTCAACA GGCCATTCGG CAAACGAAAC TTGGAGGTTC TGTGCTACTT CCCGATTGAT
GCAGATACAG ACCAAAGAGA AAAGCCAGGC TGTGGAGAGC ATAAAAACTT TCCCACCGTA
AGCCGTTCCT GTGAGCTGCA GAGTATCCAG ACCGCGGAGC AGTGGCAGCA ACATTACTCC
CAGACACAAC TCAAGCGTGA AAGCCAATGT GGGTTTAACG TCAGTGACGA GCGCAACACC
GAGGCGGGTC CGGCTTTCAA CGAGGCAATG CGCACGCACA ATCTTGGTAG CACAATCCCA
GAACACTTGT TCATGATGCC AAATGAGTTT CGCATTGCTA CCTGGCCGCA AAACATCCCC
TTAGAACTGC CGATCGAAGC GTTCTTCTAC GTAGACGCGA CTGGGCTGAT CGATGCCAAG
AAAGATCGTG ACAGTTTCCA AGCAAAAACC AGCATACGCT TACCGTTGAT AAAGATCACA
TTACCTGCCA ACCGGCAACA GGACGCATTG TTCGATTACA GGCCCGAAGA CAATAACTGA
|
|---|
| Protein sequence | MSLRSTLILA LLMSGCATTP PVVTHNAPLA ARAYQEGNLV AARLSERYHY APPDCGEDSK
PAFLCSGVIF RATHYSPAYD AWNPSPPSVV SGGVSFSYLR KDAKFNTMLP GQHNGYILHP
VLNRPFGKRN LEVLCYFPID ADTDQREKPG CGEHKNFPTV SRSCELQSIQ TAEQWQQHYS
QTQLKRESQC GFNVSDERNT EAGPAFNEAM RTHNLGSTIP EHLFMMPNEF RIATWPQNIP
LELPIEAFFY VDATGLIDAK KDRDSFQAKT SIRLPLIKIT LPANRQQDAL FDYRPEDNN
|
|---|
| |