Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3873 |
Symbol | |
ID | 5871667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4320396 |
End bp | 4321292 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548995 |
Product | hypothetical protein |
Protein accession | YP_001670099 |
Protein GI | 167034868 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGTT CATTGCGCCG TGGCTCGCTG GAAATGGTCG CTGCCATGCT GATTTCCGGG ACCATCGGCT GGTTCGTGCT GGTGTCTGGC CTACCGGTGC TGGATGTGGT GTTCTGGCGC TGCGTGTTCG GTGCCGTGAC CTTGCTGGCG ATTTGCGCCG CATTTGGGCT TCTACGGCCG GGAGTGATCA GCCGCACGGC ATTCTTGCTG GCGATTGCCA GTGGGGTGGC CATTGTCGGC AACTGGCTGT TGTTGTTCGC CTCGTACTCG CGGGCATCGA TTGCCATTGG TACGGCGGTG TACAACGTGC AGCCGTTCAT GCTGGTGGGC CTGGCGGCAC TGTTTTTGGG CGAGAAAATC ACCTTGGCCA AGGTGACCTG GCTGAGCGTG GCGTTCCTCG GCATGCTGGC CATCGTCAGT GCACATGGGG CGGGGCAGGG CAGTGGCGAG GATTATTTGC TCGGGATTGC CCTGGCGCTG GGGGCAGCGT TGTTGTATGC AATCGCTGCG TTGATCATCA AGCGCCTGAG TGGCACGCCC CCGCACCTGA TCGCGTTGAT TCAGGTAGCC ACGGGTGCGC TGCTGCTGGC GCCGTGGGTC AAGCTTGGCG GCTTGCCGAG TGAAGTGCCG GCGCTGGCCA GCCTGCTGAC GCTGGGCATG GTGCATACCG GCCTGATGTA TGTGCTGCTG TACAGTGCCA TACAGCGTTT GCCCACGGCG TTGACCGGTG CGCTGTCGTT CATTTACCCG ATTGCGGCGA TCCTGGTGGA CTGGGTGGCG TTCGGGCACC GACTGGCGCC GCTGCAGTGG CTGGGGGTGG GGTTGATCTT GCTGGCGGCG GCGGGAATGC AGCAGGGATG GTGGTTCCGA CCGGCGCGGG TTGCCGTCAA AAGTTGA
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Protein sequence | MDSSLRRGSL EMVAAMLISG TIGWFVLVSG LPVLDVVFWR CVFGAVTLLA ICAAFGLLRP GVISRTAFLL AIASGVAIVG NWLLLFASYS RASIAIGTAV YNVQPFMLVG LAALFLGEKI TLAKVTWLSV AFLGMLAIVS AHGAGQGSGE DYLLGIALAL GAALLYAIAA LIIKRLSGTP PHLIALIQVA TGALLLAPWV KLGGLPSEVP ALASLLTLGM VHTGLMYVLL YSAIQRLPTA LTGALSFIYP IAAILVDWVA FGHRLAPLQW LGVGLILLAA AGMQQGWWFR PARVAVKS
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