Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3854 |
Symbol | |
ID | 5871648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4298365 |
End bp | 4299720 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641548976 |
Product | xanthine permease |
Protein accession | YP_001670080 |
Protein GI | 167034849 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease [TIGR03173] xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00662261 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.542415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGT CACGCAAGGC GTATATCCCC ATTGCGCCGC CGCGCGAACC CTTGCCCCTG TTCCAACTGA TCCTGGTTGG CCTGCAACAC GTTCTGCTGA TGTACGGTGG CGCGATCGCC GTGCCGTTGA TCATCGGCCA GGCCGCTGGG TTGTCCCGTG AAGAAGTCGC TTTCCTGATC AACGCCGACC TGCTGGTCGC TGGCGTCGCT ACCATCATCC AGTCGTTCGG TATCGGCCCG GTGGGCATCC GCATGCCGGT GATGATGGGT GCCAGTTTCG CGGCCGTCGG CAGCATGGTG GCCATGGCCG GCATGCCCGG CGTAGGCCTG CAGGGGATCT TCGGTGCGAC CATCGCCGCC GGGTTCTTCG GCATGCTGAT CGCCCCGTTC ATGTCCAAGG TCGTACGCTT CTTCCCGCCG CTGGTCACCG GTACGGTGAT CACCTCGATT GGCCTGTCGC TGTTCCCCGT GGCAGTCAAT TGGGCGGGTG GCGGCCATGA AGCCGAAACC TTCGGCTCGC CGATCTACCT GTTGGTGGCC GGCTTGGTAT TGGCTGTGAT CCTGCTGATC AACCGCTTCA TGCGCGGCTT CTGGGTCAAC GTGTCGGTAC TGGTGGGCAT GGGCCTTGGC TACATCCTGG CCGGCTCCAT CGGCATGGTC GACCTGTCTG GCCTGAAGGA CGCGCCGTGG TTGCAGGTGG TCACCCCCCT GCACTTCGGC ATGCCGACAT TCAGCCTGGC ACCCATCCTG TCCATGTGCC TGGTGGTGGT GATCATCTTC GTCGAGTCCA CCGGCATGTT CCTGGCCCTG GGCAAGGTGA CCGATCGCGA AGTGACCCCC GGCATGCTGC GTCGCGGCCT GCTGTGCGAT GCCGGTGCGT CGTTCATCGC CGGTTTCTTC AACACCTTCA CCCACTCCTC GTTCGCCCAG AACATCGGCC TGGTGCAAAT GACCGGGGTG CGCTGCCGCT TTGTCACCAT CGTGGCCGGT GCCCTGTTGA TCCTGCTCAG CCTGCTGCCC AAGGCAGCCT TCCTGATTGC CTCGATCCCA CCTGCGGTAC TGGGCGGCGC GTCCATCGCC ATGTTCGGCA TGGTCACCGC CACCGGGATC AAGATTCTTC AGGAGGCGGA CATCGGCGAC CGCCGCAACC AGCTGCTGGT TGCCGTGAGC GTCGGCTTCG GGTTGATCCC CGTGGTGCGT CCGGAGTTCT TCGCCCAGAT GCCACAGTGG ATGGAACCCA TCACCCACAG TGGTATCGCC ATGGCCACGG TCAGTGCCCT GGTGTTGAAC GTCCTGTTCA ACATCCTCGG TGGTGCCGAC CGCGCGGTGC ACAACGACGC CTGTCACCAG CATTGA
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Protein sequence | MSESRKAYIP IAPPREPLPL FQLILVGLQH VLLMYGGAIA VPLIIGQAAG LSREEVAFLI NADLLVAGVA TIIQSFGIGP VGIRMPVMMG ASFAAVGSMV AMAGMPGVGL QGIFGATIAA GFFGMLIAPF MSKVVRFFPP LVTGTVITSI GLSLFPVAVN WAGGGHEAET FGSPIYLLVA GLVLAVILLI NRFMRGFWVN VSVLVGMGLG YILAGSIGMV DLSGLKDAPW LQVVTPLHFG MPTFSLAPIL SMCLVVVIIF VESTGMFLAL GKVTDREVTP GMLRRGLLCD AGASFIAGFF NTFTHSSFAQ NIGLVQMTGV RCRFVTIVAG ALLILLSLLP KAAFLIASIP PAVLGGASIA MFGMVTATGI KILQEADIGD RRNQLLVAVS VGFGLIPVVR PEFFAQMPQW MEPITHSGIA MATVSALVLN VLFNILGGAD RAVHNDACHQ H
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