Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3816 |
Symbol | |
ID | 5871609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4255149 |
End bp | 4256573 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548938 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_001670042 |
Protein GI | 167034811 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAA CCAGCAGTAC CGCCTATAAC TACAAGGTGG TCCGCCAATT CGCCATCATG ACGGTGGTGT GGGGAATCGT CGGGATGGGG CTCGGCGTCT TCATCGCCGC CCAGCTCGCC TGGCCTTCCC TCAACTTCGA CCTCCCCTGG ACCAGCTTCG GCCGCCTGCG CCCCCTGCAT ACCAATGCGG TGATCTTCGC GTTCGGCGGC TGTGCGCTGT TTGCCACCTC CTATTATTCG GTGCAACGCA CCTGCCAGAC CACCCTGTTC GCACCGGGCC TGGCCGCGTT CACCTTCTGG GGCTGGCAAC TGGTGATCGT GCTGGCGGCC ATCAGCCTGC CGCTTGGCTA CACCAGCTCC AAGGAATACG CCGAACTGGA ATGGCCGATC GATATCCTGA TCACCATCGT CTGGGTGGGC TACGCCATCG TGTTCTTCGG CACGCTGATG AAGCGCAACA CCAAGCACAT CTACGTGGGT AACTGGTTCT TCGGCGCCTT TATCCTCACC GTGGCGCTGC TGCACATCGT CAACAACCTG GAACTGCCCG TCAGCCTGAC CAAGTCGTAC TCGGTCTACG CCGGCGCCAC CGACGCCATG GTGCAGTGGT GGTACGGCCA CAACGCGGTG GGCTTCTTCC TGACCGCAGG CTTCCTGGGG ATGATGTACT ACTACGTGCC CAAACAGGCC GAACGCCCGG TGTATTCCTA TCGCCTGTCG ATCGTGCACT TCTGGGCCCT GATCACCCTG TACATCTGGG CAGGCCCCCA CCACCTGCAC TACACCGCCC TGCCCGACTG GGCACAGTCG CTGGGCATGG TGATGTCGCT GATCCTGCTG GCACCGAGCT GGGGCGGCAT GATCAACGGC ATGATGACCC TGTCGGGCGC CTGGCACAAA CTGCGCAGCG ACCCGATCCT GCGCTTCCTG GTCGTATCGC TGGCGTTCTA CGGCATGTCC ACCTTCGAAG GCCCGATGAT GGCCATCAAG ACGGTCAACG CCCTGTCCCA CTACACCGAC TGGACCATCG GCCACGTGCA CGCTGGCGCC CTCGGCTGGG TCGCCATGAT CTCGATCGGT GCGCTGTACC ACACCATCCC GAAAGTGTTT GGCAAAGAGC GCATGTACAG CCTCGGCCTG ATCAACGCGC ACTTCTGGCT GGCCACCATC GGCACCGTGC TGTACATCGC CTCGATGTGG GTCAACGGCA TCGCCCAGGG CCTGATGTGG CGCGCGGTCA ACAGCGACGG CACGCTCACC TACTCGTTCG TGGAAACCCT GGTGGCCAGC CACCCAGGCT TCGTCGTGCG CTTCGTCGGC GGTGCGATCT TCCTCAGCGG CATGTTCCTG ATGGCCTGGA ACACCTGGCG CACCGTGCGT TCGCCAGCGC TTGACGTCGC CCCTGCGAAC GCCCAGTTGG CTTGA
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Protein sequence | MNTTSSTAYN YKVVRQFAIM TVVWGIVGMG LGVFIAAQLA WPSLNFDLPW TSFGRLRPLH TNAVIFAFGG CALFATSYYS VQRTCQTTLF APGLAAFTFW GWQLVIVLAA ISLPLGYTSS KEYAELEWPI DILITIVWVG YAIVFFGTLM KRNTKHIYVG NWFFGAFILT VALLHIVNNL ELPVSLTKSY SVYAGATDAM VQWWYGHNAV GFFLTAGFLG MMYYYVPKQA ERPVYSYRLS IVHFWALITL YIWAGPHHLH YTALPDWAQS LGMVMSLILL APSWGGMING MMTLSGAWHK LRSDPILRFL VVSLAFYGMS TFEGPMMAIK TVNALSHYTD WTIGHVHAGA LGWVAMISIG ALYHTIPKVF GKERMYSLGL INAHFWLATI GTVLYIASMW VNGIAQGLMW RAVNSDGTLT YSFVETLVAS HPGFVVRFVG GAIFLSGMFL MAWNTWRTVR SPALDVAPAN AQLA
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