| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3810 |
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| Symbol | |
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| ID | 5871603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4250718 |
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| End bp | 4251248 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641548932 |
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| Product | extracytoplasmic-function sigma-70 factor |
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| Protein accession | YP_001670036 |
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| Protein GI | 167034805 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.775772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAC AACTATCCAC AAGTAAGTGC GATTCACCAT TACTGCAGGC CTTCGTCGAC
AACCGCAGCA TCCTGGTCAA GATCGCCGCA CGCATCACCG GCTGCCGCTC GCGTGCCGAA
GATGTGGTGC AGGACGCCTT CTTTCGGCTC AGCGCCGCCC CGCAGATCAC ATCGTCTTTC
AAGGCGCAGC TGAGCTACTT GTTCCAGATC GTGCGCAACC TGGCCATTGA CCATTACCGC
AAGCAGGCGA TGGAGCTGAA GTACTCCGGC ACCGAGGAGG AAGGCCTGAA TGTGGTCATC
CAGAACGCCT CGCCCGAAGC AACCCACATC AACCTTGCCG CGCTGGACGA CATTGCCGAG
GCGCTGAACG AACTGCCGCA GCGTACCCGC TATGCGTTCG AGATGTATCG CCTGCATGGC
GTGCCGCAGA AAGACATTGC CAAGGAGCTG GGCGTGTCGC CGACACTGGT CAACTTCATG
ATCCGCGATG CGCTGGTGCA CTGCCGCAAG ACCGCCAATC GGCAGGCCTG A
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| Protein sequence | MAEQLSTSKC DSPLLQAFVD NRSILVKIAA RITGCRSRAE DVVQDAFFRL SAAPQITSSF
KAQLSYLFQI VRNLAIDHYR KQAMELKYSG TEEEGLNVVI QNASPEATHI NLAALDDIAE
ALNELPQRTR YAFEMYRLHG VPQKDIAKEL GVSPTLVNFM IRDALVHCRK TANRQA
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