Gene PputGB1_3744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3744 
Symbol 
ID5871537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4166378 
End bp4168309 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content63% 
IMG OID641548866 
Productintegral membrane sensor hybrid histidine kinase 
Protein accessionYP_001669970 
Protein GI167034739 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC GCTTGAGCTG GGACATTCAT ACCCGCACCC AGATCATCAG CCTCGGCCCT 
GCCCTGCTGC TGACCTTGCT GTTGATCAGC TTCTTTACCT TCGTGCGTAT CCAGGACCTG
CGCCAGGAAC TCAACCACAC CGGGCAACTG ATCGCCAACC AGTTGGCACC GGCGTCGGAG
TACGGGGTGA TTTCGGGCAA CAACGAAGTA CTTGAAGGGC TGATGCGCGC CACCCTCAGC
ATCCCGCATG TGCGTTTTCT GGAAGTGCAG GACAGCCGCA ACCACATCCT CGTGTACGTG
GAGCAGTCCG ACGAAAGCGC CAACCGCGCA CAACAGGTAG AAGTGTTCCA GGCGCCCATC
CGCCTGCAAC AGATCCGCCT GGACAACGAT TTCCTGCAAC AGGGCAAGGC CACCACCCCG
GCCATTGGTG ACGACTACCT GGGCCGGGTG ATAGTCGGCA TGTCCGATGA TGCCTTCAGC
CAGCGGCAAC AGGAAATCGT GATCAAGGCC GGTATCCTTG CACTGTTCGC CCTGCTGTTC
ACCTTTTTGC TGGCTCGCCG CCTGGCCCTG AGCCTGGCCA AGCCGATCAG CGACATGGGG
CATGCGGTCA AGGCCATTCA GCAGGGCGAG TACAACACCC CCTTGCCGGT GGTGGACGAC
AGCGAACTGG GCCACCTGGC GCGTCACATC AACAACCTGG CCAGCGCCCT GGAACAGGCC
AGCGATGAAC AGAAGCAGGC CATTGCCGAA TTGATCCAGG CTCGCGAGGA GGCTGAACAG
GCCAACCGCG CGAAATCGGA CTTCCTGGCC ATGATGAGCC ATGAACTGCG CACACCGATG
AATGGCGTGC TAGGCATGCT GCAGTTGCTG GAAACCACAC CGCTGAGCAG CGAGCAGGCC
GATTACACGG CAGTGGCCAG CGAGTCCACC GGGCATTTGC TGAAGGTCAT CAACGACATC
CTCGACTTTT CGCGTATCGA GCGCGCCGCG CTGCAACTGG AGCACATCGA CTTCAATCTC
GGCGAGTTGA TCACCAGCAG TGTCCAGTCG TTCCAGCACA GCGCCCAGCA GCGCGGCCTG
GGCCTGCACC TGGAACTGCC GGCCGGCTTC GAGCAACTGC AGGTGAACGG CGACCCCACG
CGCATCCGCC AGATCCTGCT GAACCTGATA GGCAACGCCC TGAAATTCAC AGAACGCGGG
CAGGTACAGG TCGAAGCACG TTGGCAGGTA CTCGATCGGC AACTGATCTG GCTGACCTGC
AGCGTGCGCG ACACCGGCAT CGGCATCGAC AGCGACCGCC TGGAAATGAT GTTCATCGCT
TTCCAGCAGG CCGACAGCTC GATTTCCCGC CGTTATGGCG GCACCGGGCT GGGGCTTTCG
ATCGCCCGCA CCTTGGCCGA GCGCATGGGC GGCAAGCTGC GCGGTGAAAG CCGTGAGGGC
CTGGGGTCGA CTTTCACCCT GGAAATGCCA CTGGCCCTCG CCACCCCTGC CCCCGTCCCA
CTGAAGCCGC CCACCACTGC GCCAACGATA GTGCCCGACA ATGATCAGGT ACTGCTGGTA
GAGGACAACC CGGTCAACCA AAGCGTCATC GAGGCCATGC TGCGCAGCCT GGGGCTTGCG
GTATGCACGG CCGAGGATGG CCTTGAGGCG GTCGACCTGG TTGGCCAGCA GCGCTTCGCC
GCCGTGCTGA TGGATTGCCG CCTGCCACAC CTGGACGGCT ATGAAGCCAC CCGGCGCATC
CGCCAGTTGC CCAACGGCGC CGGGCTACCG ATCATCGCCC TGACCGCCAA CGCCTTGCAG
GGCGACCGCG AGCGTTGCAT GGCCGCTGGC ATGGACGACT ACCTGAGCAA ACCCTTGCGC
CGCACCGAAC TGCAGCGGGT GCTGCAGCGC TGGTTACCCG GTCGGACAAC CGCGACTGGC
GATAAATGCT AA
 
Protein sequence
MTKRLSWDIH TRTQIISLGP ALLLTLLLIS FFTFVRIQDL RQELNHTGQL IANQLAPASE 
YGVISGNNEV LEGLMRATLS IPHVRFLEVQ DSRNHILVYV EQSDESANRA QQVEVFQAPI
RLQQIRLDND FLQQGKATTP AIGDDYLGRV IVGMSDDAFS QRQQEIVIKA GILALFALLF
TFLLARRLAL SLAKPISDMG HAVKAIQQGE YNTPLPVVDD SELGHLARHI NNLASALEQA
SDEQKQAIAE LIQAREEAEQ ANRAKSDFLA MMSHELRTPM NGVLGMLQLL ETTPLSSEQA
DYTAVASEST GHLLKVINDI LDFSRIERAA LQLEHIDFNL GELITSSVQS FQHSAQQRGL
GLHLELPAGF EQLQVNGDPT RIRQILLNLI GNALKFTERG QVQVEARWQV LDRQLIWLTC
SVRDTGIGID SDRLEMMFIA FQQADSSISR RYGGTGLGLS IARTLAERMG GKLRGESREG
LGSTFTLEMP LALATPAPVP LKPPTTAPTI VPDNDQVLLV EDNPVNQSVI EAMLRSLGLA
VCTAEDGLEA VDLVGQQRFA AVLMDCRLPH LDGYEATRRI RQLPNGAGLP IIALTANALQ
GDRERCMAAG MDDYLSKPLR RTELQRVLQR WLPGRTTATG DKC